Analysis of interatomic Contacts of Structural Units in PDB entry:
8VC3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8VC3 entry

There are 5 chains in PDB entry 8VC3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1GLY 59
E
 ARG 138THR 421
B
 ARG 138THR 421
C
 ARG 138THR 421
D
 ARG 138THR 421
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 8VC3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 56Right-handed alpha
Helix 2
AA2
E
145 155Right-handed alpha
Helix 3
AA3
E
156 158Right-handed 310
Helix 4
AA4
E
159 183Right-handed alpha
Helix 5
AA5
E
185 190Right-handed alpha
Helix 6
AA6
E
220 243Right-handed alpha
Helix 7
AA7
E
253 274Right-handed alpha
Helix 8
AA8
E
290 300Right-handed alpha
Helix 9
AA9
E
301 310Right-handed 310
Helix 10
AB1
E
311 324Right-handed alpha
Helix 11
AB2
E
324 350Right-handed alpha
Helix 12
AB3
E
360 373Right-handed alpha
Helix 13
AB4
E
384 404Right-handed alpha
Helix 14
AB5
E
405 419Right-handed alpha
Helix 15
AB6
B
145 155Right-handed alpha
Helix 16
AB7
B
156 158Right-handed 310
Helix 17
AB8
B
159 183Right-handed alpha
Helix 18
AB9
B
185 191Right-handed alpha
Helix 19
AC1
B
220 244Right-handed alpha
Helix 20
AC2
B
249 252Right-handed 310
Helix 21
AC3
B
253 274Right-handed alpha
Helix 22
AC4
B
290 299Right-handed alpha
Helix 23
AC5
B
300 310Right-handed 310
Helix 24
AC6
B
311 324Right-handed alpha
Helix 25
AC7
B
324 350Right-handed alpha
Helix 26
AC8
B
360 373Right-handed alpha
Helix 27
AC9
B
384 404Right-handed alpha
Helix 28
AD1
B
405 419Right-handed alpha
Helix 29
AD2
C
145 155Right-handed alpha
Helix 30
AD3
C
156 158Right-handed 310
Helix 31
AD4
C
159 183Right-handed alpha
Helix 32
AD5
C
185 191Right-handed alpha
Helix 33
AD6
C
220 243Right-handed alpha
Helix 34
AD7
C
249 252Right-handed 310
Helix 35
AD8
C
253 274Right-handed alpha
Helix 36
AD9
C
290 300Right-handed alpha
Helix 37
AE1
C
301 309Right-handed 310
Helix 38
AE2
C
311 324Right-handed alpha
Helix 39
AE3
C
324 350Right-handed alpha
Helix 40
AE4
C
360 373Right-handed alpha
Helix 41
AE5
C
384 404Right-handed alpha
Helix 42
AE6
C
405 419Right-handed alpha
Helix 43
AE7
D
145 155Right-handed alpha
Helix 44
AE8
D
156 158Right-handed 310
Helix 45
AE9
D
159 184Right-handed alpha
Helix 46
AF1
D
185 191Right-handed alpha
Helix 47
AF2
D
220 244Right-handed alpha
Helix 48
AF3
D
249 252Right-handed 310
Helix 49
AF4
D
253 274Right-handed alpha
Helix 50
AF5
D
290 300Right-handed alpha
Helix 51
AF6
D
301 309Right-handed 310
Helix 52
AF7
D
311 324Right-handed alpha
Helix 53
AF8
D
324 350Right-handed alpha
Helix 54
AF9
D
360 373Right-handed alpha
Helix 55
AG1
D
384 404Right-handed alpha
Helix 56
AG2
D
405 419Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8VC3.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 26first strand
Strand 2
A
31 37anti-parallel
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