Analysis of interatomic Contacts of Structural Units in PDB entry:
8VH7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8VH7 entry

There are 2 chains in PDB entry 8VH7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 102	PRO 644
B	THR 101	GLU 226

There are 51 helices in PDB entry 8VH7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	103	113	Right-handed alpha
Helix 2	AA2	A	141	151	Right-handed alpha
Helix 3	AA3	A	169	181	Right-handed alpha
Helix 4	AA4	A	194	206	Right-handed alpha
Helix 5	AA5	A	223	234	Right-handed alpha
Helix 6	AA6	A	274	281	Right-handed alpha
Helix 7	AA7	A	289	303	Right-handed alpha
Helix 8	AA8	A	323	327	Right-handed 310
Helix 9	AA9	A	342	359	Right-handed alpha
Helix 10	AB1	A	360	362	Right-handed 310
Helix 11	AB2	A	363	368	Right-handed alpha
Helix 12	AB3	A	380	384	Right-handed 310
Helix 13	AB4	A	400	402	Right-handed 310
Helix 14	AB5	A	403	415	Right-handed alpha
Helix 15	AB6	A	432	437	Right-handed alpha
Helix 16	AB7	A	438	440	Right-handed 310
Helix 17	AB8	A	454	459	Right-handed 310
Helix 18	AB9	A	460	469	Right-handed alpha
Helix 19	AC1	A	487	499	Right-handed alpha
Helix 20	AC2	A	552	554	Right-handed 310
Helix 21	AC3	A	558	562	Right-handed 310
Helix 22	AC4	A	567	579	Right-handed alpha
Helix 23	AC5	A	611	621	Right-handed alpha
Helix 24	AC6	A	624	628	Right-handed 310
Helix 25	AC7	A	629	635	Right-handed alpha
Helix 26	AC8	A	636	643	Right-handed 310
Helix 27	AC9	B	103	113	Right-handed alpha
Helix 28	AD1	B	141	151	Right-handed alpha
Helix 29	AD2	B	169	181	Right-handed alpha
Helix 30	AD3	B	194	206	Right-handed alpha
Helix 31	AD4	B	223	233	Right-handed alpha
Helix 32	AD5	B	274	281	Right-handed alpha
Helix 33	AD6	B	289	303	Right-handed alpha
Helix 34	AD7	B	323	327	Right-handed 310
Helix 35	AD8	B	342	359	Right-handed alpha
Helix 36	AD9	B	360	362	Right-handed 310
Helix 37	AE1	B	363	368	Right-handed alpha
Helix 38	AE2	B	380	384	Right-handed 310
Helix 39	AE3	B	400	402	Right-handed 310
Helix 40	AE4	B	403	415	Right-handed alpha
Helix 41	AE5	B	432	437	Right-handed alpha
Helix 42	AE6	B	438	440	Right-handed 310
Helix 43	AE7	B	454	459	Right-handed 310
Helix 44	AE8	B	460	469	Right-handed alpha
Helix 45	AE9	B	487	499	Right-handed alpha
Helix 46	AF1	B	552	554	Right-handed 310
Helix 47	AF2	B	558	562	Right-handed 310
Helix 48	AF3	B	567	579	Right-handed alpha
Helix 49	AF4	B	611	621	Right-handed alpha
Helix 50	AF5	B	625	635	Right-handed alpha
Helix 51	AF6	B	636	643	Right-handed 310

There are 12 sheets in PDB entry 8VH7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	184	188	first strand
Strand 2	A	157	163	parallel
Strand 3	A	129	135	parallel
Strand 4	A	210	213	parallel
Strand 5	A	271	273	anti-parallel
Strand 6	A	240	248	anti-parallel
Strand 7	A	264	265	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	219	220	first strand
Strand 2	A	307	318	anti-parallel
Strand 3	A	240	248	parallel
Strand 4	A	255	258	anti-parallel
Strand 5	A	336	339	parallel
Strand 6	A	329	333	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	442	447	first strand
Strand 2	A	420	426	parallel
Strand 3	A	393	399	parallel
Strand 4	A	474	479	parallel
Strand 5	A	546	550	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	482	483	first strand
Strand 2	A	594	595	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	504	506	first strand
Strand 2	A	583	585	parallel
Strand 3	A	537	539	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	525	527	first strand
Strand 2	A	509	511	anti-parallel
Strand 3	A	541	542	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	184	188	first strand
Strand 2	B	157	163	parallel
Strand 3	B	129	135	parallel
Strand 4	B	210	213	parallel
Strand 5	B	271	273	anti-parallel
Strand 6	B	240	248	anti-parallel
Strand 7	B	264	265	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	219	220	first strand
Strand 2	B	307	318	anti-parallel
Strand 3	B	240	248	parallel
Strand 4	B	255	258	anti-parallel
Strand 5	B	336	339	parallel
Strand 6	B	329	333	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	442	447	first strand
Strand 2	B	420	426	parallel
Strand 3	B	393	399	parallel
Strand 4	B	474	478	parallel
Strand 5	B	546	550	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	482	483	first strand
Strand 2	B	594	595	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	504	506	first strand
Strand 2	B	583	585	parallel
Strand 3	B	537	539	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	525	527	first strand
Strand 2	B	509	511	anti-parallel
Strand 3	B	541	542	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8VH7

Analysis of interatomic Contacts of Structural Units in PDB entry:
8VH7