Analysis of interatomic Contacts of Structural Units in PDB entry:
8VTS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8VTS entry

There are 8 chains in PDB entry 8VTS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 279MET 334
B
 PHE 279MET 334
C
 PHE 279MET 334
D
 PHE 279MET 334
E
 PHE 279MET 334
F
 PHE 279PRO 333
G
 PHE 279MET 334
H
 PHE 279MET 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 24 helices in PDB entry 8VTS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
279 294Right-handed alpha
Helix 2
AA2
A
301 313Right-handed alpha
Helix 3
AA3
A
315 332Right-handed alpha
Helix 4
AA4
B
280 293Right-handed alpha
Helix 5
AA5
B
301 313Right-handed alpha
Helix 6
AA6
B
315 331Right-handed alpha
Helix 7
AA7
C
280 294Right-handed alpha
Helix 8
AA8
C
301 313Right-handed alpha
Helix 9
AA9
C
315 332Right-handed alpha
Helix 10
AB1
D
280 293Right-handed alpha
Helix 11
AB2
D
301 313Right-handed alpha
Helix 12
AB3
D
315 332Right-handed alpha
Helix 13
AB4
E
280 293Right-handed alpha
Helix 14
AB5
E
301 313Right-handed alpha
Helix 15
AB6
E
315 331Right-handed alpha
Helix 16
AB7
F
280 294Right-handed alpha
Helix 17
AB8
F
301 313Right-handed alpha
Helix 18
AB9
F
315 332Right-handed alpha
Helix 19
AC1
G
280 294Right-handed alpha
Helix 20
AC2
G
301 313Right-handed alpha
Helix 21
AC3
G
315 331Right-handed alpha
Helix 22
AC4
H
280 294Right-handed alpha
Helix 23
AC5
H
301 313Right-handed alpha
Helix 24
AC6
H
315 332Right-handed alpha
Back to top of page
There are no sheets in PDB entry 8VTS
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il