Analysis of interatomic Contacts of Structural Units in PDB entry:
8VUT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8VUT entry

There are 8 chains in PDB entry 8VUT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 25	LYS 813
B	LEU 34	PHE 814
C	LYS 25	LYS 813
D	LEU 34	PHE 814
H	GLU 1	VAL 220
I	GLU 1	VAL 220
L	ASN 1	THR 209
M	ASN 1	THR 209

There are108 helices in PDB entry 8VUT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	35	52	Right-handed alpha
Helix 2	AA2	A	71	84	Right-handed alpha
Helix 3	AA3	A	104	114	Right-handed alpha
Helix 4	AA4	A	145	159	Right-handed alpha
Helix 5	AA5	A	171	185	Right-handed alpha
Helix 6	AA6	A	204	213	Right-handed alpha
Helix 7	AA7	A	224	238	Right-handed alpha
Helix 8	AA8	A	276	297	Right-handed alpha
Helix 9	AA9	A	317	327	Right-handed alpha
Helix 10	AB1	A	457	471	Right-handed alpha
Helix 11	AB2	A	499	507	Right-handed alpha
Helix 12	AB3	A	521	526	Right-handed alpha
Helix 13	AB4	A	559	581	Right-handed alpha
Helix 14	AB5	A	584	596	Right-handed alpha
Helix 15	AB6	A	607	638	Right-handed alpha
Helix 16	AB7	A	650	655	Right-handed alpha
Helix 17	AB8	A	668	677	Right-handed alpha
Helix 18	AB9	A	680	688	Right-handed alpha
Helix 19	AC1	A	694	704	Right-handed alpha
Helix 20	AC2	A	713	724	Right-handed alpha
Helix 21	AC3	A	749	765	Right-handed alpha
Helix 22	AC4	A	765	774	Right-handed alpha
Helix 23	AC5	A	782	797	Right-handed alpha
Helix 24	AC6	A	798	812	Right-handed alpha
Helix 25	AC7	B	78	92	Right-handed alpha
Helix 26	AC8	B	108	119	Right-handed alpha
Helix 27	AC9	B	129	133	Right-handed 310
Helix 28	AD1	B	150	165	Right-handed alpha
Helix 29	AD2	B	179	192	Right-handed alpha
Helix 30	AD3	B	212	220	Right-handed alpha
Helix 31	AD4	B	232	245	Right-handed alpha
Helix 32	AD5	B	258	263	Right-handed 310
Helix 33	AD6	B	287	310	Right-handed alpha
Helix 34	AD7	B	458	472	Right-handed alpha
Helix 35	AD8	B	494	502	Right-handed alpha
Helix 36	AD9	B	516	522	Right-handed alpha
Helix 37	AE1	B	555	578	Right-handed alpha
Helix 38	AE2	B	580	594	Right-handed alpha
Helix 39	AE3	B	605	635	Right-handed alpha
Helix 40	AE4	B	652	656	Right-handed 310
Helix 41	AE5	B	669	678	Right-handed alpha
Helix 42	AE6	B	678	686	Right-handed alpha
Helix 43	AE7	B	693	702	Right-handed alpha
Helix 44	AE8	B	712	721	Right-handed alpha
Helix 45	AE9	B	751	765	Right-handed alpha
Helix 46	AF1	B	766	776	Right-handed alpha
Helix 47	AF2	B	790	814	Right-handed alpha
Helix 48	AF3	C	35	53	Right-handed alpha
Helix 49	AF4	C	71	84	Right-handed alpha
Helix 50	AF5	C	99	103	Right-handed 310
Helix 51	AF6	C	104	114	Right-handed alpha
Helix 52	AF7	C	144	158	Right-handed alpha
Helix 53	AF8	C	171	186	Right-handed alpha
Helix 54	AF9	C	204	213	Right-handed alpha
Helix 55	AG1	C	224	238	Right-handed alpha
Helix 56	AG2	C	250	255	Right-handed alpha
Helix 57	AG3	C	257	262	Right-handed alpha
Helix 58	AG4	C	276	296	Right-handed alpha
Helix 59	AG5	C	317	328	Right-handed alpha
Helix 60	AG6	C	457	470	Right-handed alpha
Helix 61	AG7	C	500	507	Right-handed 310
Helix 62	AG8	C	520	525	Right-handed alpha
Helix 63	AG9	C	559	580	Right-handed alpha
Helix 64	AH1	C	584	595	Right-handed alpha
Helix 65	AH2	C	607	638	Right-handed alpha
Helix 66	AH3	C	650	655	Right-handed alpha
Helix 67	AH4	C	669	677	Right-handed alpha
Helix 68	AH5	C	677	689	Right-handed alpha
Helix 69	AH6	C	695	704	Right-handed alpha
Helix 70	AH7	C	713	724	Right-handed alpha
Helix 71	AH8	C	749	763	Right-handed alpha
Helix 72	AH9	C	764	774	Right-handed alpha
Helix 73	AI1	C	788	813	Right-handed alpha
Helix 74	AI2	D	78	92	Right-handed alpha
Helix 75	AI3	D	108	119	Right-handed alpha
Helix 76	AI4	D	150	165	Right-handed alpha
Helix 77	AI5	D	179	192	Right-handed alpha
Helix 78	AI6	D	212	220	Right-handed alpha
Helix 79	AI7	D	232	247	Right-handed alpha
Helix 80	AI8	D	258	262	Right-handed 310
Helix 81	AI9	D	287	310	Right-handed alpha
Helix 82	AJ1	D	335	339	Right-handed 310
Helix 83	AJ2	D	443	448	Right-handed 310
Helix 84	AJ3	D	458	472	Right-handed alpha
Helix 85	AJ4	D	496	502	Right-handed alpha
Helix 86	AJ5	D	517	521	Right-handed 310
Helix 87	AJ6	D	556	578	Right-handed alpha
Helix 88	AJ7	D	580	594	Right-handed alpha
Helix 89	AJ8	D	604	633	Right-handed alpha
Helix 90	AJ9	D	647	652	Right-handed alpha
Helix 91	AK1	D	669	678	Right-handed alpha
Helix 92	AK2	D	685	689	Right-handed 310
Helix 93	AK3	D	693	702	Right-handed alpha
Helix 94	AK4	D	711	721	Right-handed alpha
Helix 95	AK5	D	751	765	Right-handed alpha
Helix 96	AK6	D	766	776	Right-handed alpha
Helix 97	AK7	D	786	814	Right-handed alpha
Helix 98	AK8	H	103	107	Right-handed 310
Helix 99	AK9	H	165	167	Right-handed 310
Helix 100	AL1	H	196	198	Right-handed 310
Helix 101	AL2	I	87	91	Right-handed 310
Helix 102	AL3	I	165	167	Right-handed 310
Helix 103	AL4	I	196	198	Right-handed 310
Helix 104	AL5	L	28	32	Right-handed 310
Helix 105	AL6	L	121	126	Right-handed alpha
Helix 106	AL7	L	181	188	Right-handed alpha
Helix 107	AL8	M	121	126	Right-handed alpha
Helix 108	AL9	M	181	188	Right-handed alpha

There are 56 sheets in PDB entry 8VUT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	62	first strand
Strand 2	A	28	33	parallel
Strand 3	A	65	66	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	62	first strand
Strand 2	A	28	33	parallel
Strand 3	A	90	91	parallel
Strand 4	A	118	120	parallel
Strand 5	A	138	139	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	163	167	first strand
Strand 2	A	218	222	parallel
Strand 3	A	246	249	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	340	341	first strand
Strand 2	A	344	346	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	365	367	first strand
Strand 2	A	372	374	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	434	436	first strand
Strand 2	A	453	455	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	488	489	first strand
Strand 2	A	496	497	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	710	712	first strand
Strand 2	A	539	543	anti-parallel
Strand 3	A	727	728	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	70	73	first strand
Strand 2	B	37	40	parallel
Strand 3	B	98	100	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	203	205	first strand
Strand 2	B	171	174	parallel
Strand 3	B	227	230	parallel
Strand 4	B	255	257	parallel
Strand 5	B	277	281	parallel
Strand 6	B	361	365	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	405	410	first strand
Strand 2	B	474	479	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	418	420	first strand
Strand 2	B	452	457	anti-parallel
Strand 3	B	434	438	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	707	710	first strand
Strand 2	B	534	537	anti-parallel
Strand 3	B	728	729	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	29	first strand
Strand 2	C	61	62	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	33	first strand
Strand 2	C	65	66	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	90	92	first strand
Strand 2	C	118	120	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	166	167	first strand
Strand 2	C	195	196	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	220	221	first strand
Strand 2	C	248	249	parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	267	271	first strand
Strand 2	C	351	355	anti-parallel
Strand 3	C	363	367	anti-parallel
Strand 4	C	372	374	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	340	341	first strand
Strand 2	C	344	346	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	410	412	first strand
Strand 2	C	453	456	anti-parallel
Strand 3	C	434	436	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	487	489	first strand
Strand 2	C	496	498	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	541	543	first strand
Strand 2	C	727	729	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	70	73	first strand
Strand 2	D	37	40	parallel
Strand 3	D	98	99	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	125	126	first strand
Strand 2	D	145	146	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	170	173	first strand
Strand 2	D	200	204	parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	226	227	first strand
Strand 2	D	254	257	parallel
Strand 3	D	277	280	parallel
Strand 4	D	362	364	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	341	342	first strand
Strand 2	D	347	348	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	405	406	first strand
Strand 2	D	474	475	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	409	410	first strand
Strand 2	D	478	479	parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	418	420	first strand
Strand 2	D	454	457	anti-parallel
Strand 3	D	434	436	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	487	488	first strand
Strand 2	D	493	494	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	708	710	first strand
Strand 2	D	534	538	anti-parallel
Strand 3	D	727	729	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	17	25	anti-parallel
Strand 3	H	78	84	anti-parallel
Strand 4	H	68	73	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	119	120	parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	59	60	first strand
Strand 2	H	45	50	anti-parallel
Strand 3	H	34	39	anti-parallel
Strand 4	H	93	99	anti-parallel
Strand 5	H	109	110	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	59	60	first strand
Strand 2	H	45	50	anti-parallel
Strand 3	H	34	39	anti-parallel
Strand 4	H	93	99	anti-parallel
Strand 5	H	116	117	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	129	133	first strand
Strand 2	H	144	154	anti-parallel
Strand 3	H	185	194	anti-parallel
Strand 4	H	172	174	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	129	133	first strand
Strand 2	H	144	154	anti-parallel
Strand 3	H	185	194	anti-parallel
Strand 4	H	178	179	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	160	163	first strand
Strand 2	H	204	209	anti-parallel
Strand 3	H	214	219	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	3	7	first strand
Strand 2	I	17	25	anti-parallel
Strand 3	I	78	84	anti-parallel
Strand 4	I	68	73	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	11	12	first strand
Strand 2	I	119	120	parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	59	60	first strand
Strand 2	I	45	50	anti-parallel
Strand 3	I	34	39	anti-parallel
Strand 4	I	95	98	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	129	133	first strand
Strand 2	I	144	154	anti-parallel
Strand 3	I	185	194	anti-parallel
Strand 4	I	172	174	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	129	133	first strand
Strand 2	I	144	154	anti-parallel
Strand 3	I	185	194	anti-parallel
Strand 4	I	178	179	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	160	163	first strand
Strand 2	I	204	209	anti-parallel
Strand 3	I	214	219	anti-parallel

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There are 5 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	12	first strand
Strand 2	L	101	105	parallel
Strand 3	L	88	92	anti-parallel
Strand 4	L	35	38	anti-parallel
Strand 5	L	46	49	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	18	23	first strand
Strand 2	L	73	78	anti-parallel
Strand 3	L	64	66	anti-parallel

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There are 4 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	114	118	first strand
Strand 2	L	130	139	anti-parallel
Strand 3	L	172	180	anti-parallel
Strand 4	L	159	161	anti-parallel

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There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	114	118	first strand
Strand 2	L	130	139	anti-parallel
Strand 3	L	172	180	anti-parallel
Strand 4	L	165	166	anti-parallel

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There are 4 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	154	155	first strand
Strand 2	L	144	149	anti-parallel
Strand 3	L	191	197	anti-parallel
Strand 4	L	200	206	anti-parallel

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There are 4 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	4	5	first strand
Strand 2	M	18	24	anti-parallel
Strand 3	M	73	78	anti-parallel
Strand 4	M	65	66	anti-parallel

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There are 5 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	9	12	first strand
Strand 2	M	101	105	parallel
Strand 3	M	88	92	anti-parallel
Strand 4	M	35	39	anti-parallel
Strand 5	M	46	49	anti-parallel

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There are 4 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	114	118	first strand
Strand 2	M	130	139	anti-parallel
Strand 3	M	172	180	anti-parallel
Strand 4	M	160	161	anti-parallel

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There are 4 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	114	118	first strand
Strand 2	M	130	139	anti-parallel
Strand 3	M	172	180	anti-parallel
Strand 4	M	165	166	anti-parallel

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There are 4 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	154	155	first strand
Strand 2	M	144	149	anti-parallel
Strand 3	M	191	197	anti-parallel
Strand 4	M	200	206	anti-parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 8VUT

Analysis of interatomic Contacts of Structural Units in PDB entry:
8VUT