Analysis of interatomic Contacts of Structural Units in PDB entry:
8VXB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8VXB entry

There is 1 chain in PDB entry 8VXB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 284
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 8VXB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 20Right-handed alpha
Helix 2
AA2
A
31 34Right-handed 310
Helix 3
AA3
A
54 59Right-handed alpha
Helix 4
AA4
A
61 68Right-handed 310
Helix 5
AA5
A
75 79Right-handed 310
Helix 6
AA6
A
110 115Right-handed alpha
Helix 7
AA7
A
139 143Right-handed 310
Helix 8
AA8
A
148 172Right-handed alpha
Helix 9
AA9
A
174 185Right-handed alpha
Helix 10
AB1
A
185 203Right-handed alpha
Helix 11
AB2
A
209 213Right-handed 310
Helix 12
AB3
A
214 219Right-handed 310
Helix 13
AB4
A
220 230Right-handed alpha
Helix 14
AB5
A
235 262Right-handed alpha
Helix 15
AB6
A
267 284Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8VXB.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 74first strand
Strand 2
A
89 95anti-parallel
Strand 3
A
100 107anti-parallel
Strand 4
A
45 51parallel
Strand 5
A
23 29anti-parallel
Strand 6
A
121 126anti-parallel
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