Analysis of interatomic Contacts of Structural Units in PDB entry:
8VYA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8VYA entry

There are 6 chains in PDB entry 8VYA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 912LEU 966
B
 THR 912LEU 966
C
 THR 912LEU 966
D
 ILE 1172LEU 1203
E
 ILE 1172GLU 1202
F
 ILE 1172ASP 1199
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 8VYA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
912 966Right-handed alpha
Helix 2
AA2
B
913 966Right-handed alpha
Helix 3
AA3
C
912 966Right-handed alpha
Helix 4
AA4
D
1179 1193Right-handed alpha
Helix 5
AA5
D
1194 1197Right-handed 310
Helix 6
AA6
E
1179 1193Right-handed alpha
Helix 7
AA7
E
1194 1197Right-handed 310
Helix 8
AA8
F
1179 1193Right-handed alpha
Helix 9
AA9
F
1194 1197Right-handed 310
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There are no sheets in PDB entry 8VYA
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