Analysis of interatomic Contacts of Structural Units in PDB entry:
8W0N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8W0N entry

There are 2 chains in PDB entry 8W0N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 258
B
 MET 1PRO 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 8W0N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 6Right-handed 310
Helix 2
AA2
A
17 30Right-handed alpha
Helix 3
AA3
A
44 56Right-handed alpha
Helix 4
AA4
A
68 84Right-handed alpha
Helix 5
AA5
A
100 104Right-handed 310
Helix 6
AA6
A
105 117Right-handed alpha
Helix 7
AA7
A
117 134Right-handed alpha
Helix 8
AA8
A
145 149Right-handed 310
Helix 9
AA9
A
155 177Right-handed alpha
Helix 10
AB1
A
178 180Right-handed 310
Helix 11
AB2
A
193 200Right-handed alpha
Helix 12
AB3
A
202 212Right-handed alpha
Helix 13
AB4
A
220 233Right-handed alpha
Helix 14
AB5
A
234 237Right-handed 310
Helix 15
AB6
A
249 253Right-handed 310
Helix 16
AB7
B
2 6Right-handed 310
Helix 17
AB8
B
17 30Right-handed alpha
Helix 18
AB9
B
40 43Right-handed 310
Helix 19
AC1
B
44 56Right-handed alpha
Helix 20
AC2
B
68 84Right-handed alpha
Helix 21
AC3
B
100 104Right-handed 310
Helix 22
AC4
B
105 117Right-handed alpha
Helix 23
AC5
B
117 134Right-handed alpha
Helix 24
AC6
B
145 149Right-handed 310
Helix 25
AC7
B
155 177Right-handed alpha
Helix 26
AC8
B
178 180Right-handed 310
Helix 27
AC9
B
193 200Right-handed alpha
Helix 28
AD1
B
202 212Right-handed alpha
Helix 29
AD2
B
220 233Right-handed alpha
Helix 30
AD3
B
234 237Right-handed 310
Helix 31
AD4
B
249 253Right-handed 310
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There are 2 sheets in PDB entry 8W0N. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 63first strand
Strand 2
A
33 38parallel
Strand 3
A
9 12parallel
Strand 4
A
88 91parallel
Strand 5
A
139 143parallel
Strand 6
A
182 188parallel
Strand 7
A
243 246parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 63first strand
Strand 2
B
33 38parallel
Strand 3
B
9 12parallel
Strand 4
B
88 91parallel
Strand 5
B
139 143parallel
Strand 6
B
182 188parallel
Strand 7
B
243 246parallel
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