Analysis of interatomic Contacts of Structural Units in PDB entry:
8W1A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8W1A entry

There are 2 chains in PDB entry 8W1A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 42SER 331
B
 VAL 38SER 331
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 8W1A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 75Right-handed alpha
Helix 2
AA2
A
76 79Right-handed 310
Helix 3
AA3
A
80 109Right-handed alpha
Helix 4
AA4
A
110 113Right-handed 310
Helix 5
AA5
A
114 149Right-handed alpha
Helix 6
AA6
A
153 156Right-handed 310
Helix 7
AA7
A
157 180Right-handed alpha
Helix 8
AA8
A
200 202Right-handed 310
Helix 9
AA9
A
203 220Right-handed alpha
Helix 10
AB1
A
220 242Right-handed alpha
Helix 11
AB2
A
250 264Right-handed alpha
Helix 12
AB3
A
264 279Right-handed alpha
Helix 13
AB4
A
285 318Right-handed alpha
Helix 14
AB5
A
318 330Right-handed alpha
Helix 15
AB6
B
46 74Right-handed alpha
Helix 16
AB7
B
75 79Right-handed 310
Helix 17
AB8
B
80 109Right-handed alpha
Helix 18
AB9
B
110 113Right-handed 310
Helix 19
AC1
B
114 149Right-handed alpha
Helix 20
AC2
B
153 156Right-handed 310
Helix 21
AC3
B
157 180Right-handed alpha
Helix 22
AC4
B
200 202Right-handed 310
Helix 23
AC5
B
203 218Right-handed alpha
Helix 24
AC6
B
220 241Right-handed alpha
Helix 25
AC7
B
250 264Right-handed alpha
Helix 26
AC8
B
264 279Right-handed alpha
Helix 27
AC9
B
285 317Right-handed alpha
Helix 28
AD1
B
318 331Right-handed alpha
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There are 2 sheets in PDB entry 8W1A. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 187first strand
Strand 2
A
194 197anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
184 187first strand
Strand 2
B
194 197anti-parallel
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