Analysis of interatomic Contacts of Structural Units in PDB entry:
8W1Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8W1Z entry

There are 2 chains in PDB entry 8W1Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 41VAL 692
B
 HIS 41VAL 692
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 8W1Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
41 50Right-handed alpha
Helix 2
AA2
A
102 106Right-handed 310
Helix 3
AA3
A
125 130Right-handed alpha
Helix 4
AA4
A
293 297Right-handed 310
Helix 5
AA5
A
308 316Right-handed alpha
Helix 6
AA6
A
317 324Right-handed 310
Helix 7
AA7
A
326 341Right-handed alpha
Helix 8
AA8
A
402 410Right-handed alpha
Helix 9
AA9
A
429 458Right-handed alpha
Helix 10
AB1
A
463 494Right-handed alpha
Helix 11
AB2
A
496 507Right-handed alpha
Helix 12
AB3
A
507 545Right-handed alpha
Helix 13
AB4
A
549 570Right-handed alpha
Helix 14
AB5
A
571 573Right-handed 310
Helix 15
AB6
A
592 626Right-handed alpha
Helix 16
AB7
A
632 660Right-handed alpha
Helix 17
AB8
A
667 692Right-handed alpha
Helix 18
AB9
B
42 49Right-handed alpha
Helix 19
AC1
B
100 105Right-handed alpha
Helix 20
AC2
B
125 131Right-handed alpha
Helix 21
AC3
B
273 277Right-handed 310
Helix 22
AC4
B
293 297Right-handed 310
Helix 23
AC5
B
307 316Right-handed alpha
Helix 24
AC6
B
317 320Right-handed 310
Helix 25
AC7
B
326 343Right-handed alpha
Helix 26
AC8
B
400 410Right-handed alpha
Helix 27
AC9
B
429 458Right-handed alpha
Helix 28
AD1
B
463 493Right-handed alpha
Helix 29
AD2
B
500 507Right-handed alpha
Helix 30
AD3
B
508 545Right-handed alpha
Helix 31
AD4
B
549 570Right-handed alpha
Helix 32
AD5
B
571 573Right-handed 310
Helix 33
AD6
B
591 626Right-handed alpha
Helix 34
AD7
B
629 651Right-handed alpha
Helix 35
AD8
B
651 660Right-handed alpha
Helix 36
AD9
B
671 692Right-handed alpha
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There are 6 sheets in PDB entry 8W1Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 58first strand
Strand 2
A
65 70anti-parallel
Strand 3
A
87 91parallel
Strand 4
A
111 115parallel
Strand 5
A
136 140parallel
Strand 6
A
161 165parallel
Strand 7
A
185 189parallel
Strand 8
A
207 212parallel
Strand 9
A
230 235parallel
Strand 10
A
256 260parallel
Strand 11
A
279 281parallel
Strand 12
A
302 304parallel
Strand 13
A
412 413parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 98first strand
Strand 2
A
122 124parallel
Strand 3
A
147 149parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 198first strand
Strand 2
A
220 221parallel
Strand 3
A
244 245parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 204first strand
Strand 2
A
226 227parallel
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There are 12 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 57first strand
Strand 2
B
66 70anti-parallel
Strand 3
B
87 91parallel
Strand 4
B
111 115parallel
Strand 5
B
136 140parallel
Strand 6
B
161 165parallel
Strand 7
B
187 190parallel
Strand 8
B
210 212parallel
Strand 9
B
233 235parallel
Strand 10
B
258 260parallel
Strand 11
B
279 281parallel
Strand 12
B
302 304parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
122 124first strand
Strand 2
B
147 149parallel
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