Analysis of interatomic Contacts of Structural Units in PDB entry:
8W26


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8W26 entry

There is 1 chain in PDB entry 8W26 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 12GLN 405
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 8W26. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 26Right-handed alpha
Helix 2
AA2
A
30 47Right-handed alpha
Helix 3
AA3
A
83 87Right-handed 310
Helix 4
AA4
A
88 97Right-handed alpha
Helix 5
AA5
A
136 146Right-handed alpha
Helix 6
AA6
A
177 222Right-handed alpha
Helix 7
AA7
A
226 242Right-handed alpha
Helix 8
AA8
A
268 277Right-handed alpha
Helix 9
AA9
A
294 297Right-handed 310
Helix 10
AB1
A
299 308Right-handed alpha
Helix 11
AB2
A
336 340Right-handed 310
Helix 12
AB3
A
341 344Right-handed 310
Helix 13
AB4
A
345 350Right-handed alpha
Helix 14
AB5
A
352 354Right-handed 310
Helix 15
AB6
A
355 369Right-handed alpha
Helix 16
AB7
A
377 404Right-handed alpha
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There are 2 sheets in PDB entry 8W26. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 82first strand
Strand 2
A
62 69anti-parallel
Strand 3
A
50 56anti-parallel
Strand 4
A
161 170anti-parallel
Strand 5
A
150 158anti-parallel
Strand 6
A
100 103anti-parallel
Strand 7
A
110 114anti-parallel
Strand 8
A
133 134anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
256 263first strand
Strand 2
A
246 253anti-parallel
Strand 3
A
327 334anti-parallel
Strand 4
A
311 319anti-parallel
Strand 5
A
288 292anti-parallel
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