Analysis of interatomic Contacts of Structural Units in PDB entry:
8W2C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8W2C entry

There are 2 chains in PDB entry 8W2C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2727CYS 2979
B
 GLU 2726GLY 2981
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 8W2C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2753 2756Right-handed 310
Helix 2
AA2
A
2757 2768Right-handed alpha
Helix 3
AA3
A
2785 2808Right-handed alpha
Helix 4
AA4
A
2820 2834Right-handed alpha
Helix 5
AA5
A
2859 2871Right-handed alpha
Helix 6
AA6
A
2877 2908Right-handed alpha
Helix 7
AA7
A
2931 2936Right-handed alpha
Helix 8
AA8
A
2937 2942Right-handed 310
Helix 9
AA9
A
2957 2962Right-handed alpha
Helix 10
AB1
A
2962 2978Right-handed alpha
Helix 11
AB2
B
2753 2756Right-handed 310
Helix 12
AB3
B
2757 2768Right-handed alpha
Helix 13
AB4
B
2785 2808Right-handed alpha
Helix 14
AB5
B
2820 2834Right-handed alpha
Helix 15
AB6
B
2859 2870Right-handed alpha
Helix 16
AB7
B
2877 2908Right-handed alpha
Helix 17
AB8
B
2931 2936Right-handed alpha
Helix 18
AB9
B
2937 2942Right-handed 310
Helix 19
AC1
B
2957 2962Right-handed alpha
Helix 20
AC2
B
2962 2978Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8W2C.

There are 14 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2730 2734first strand
Strand 2
A
2771 2776anti-parallel
Strand 3
A
2742 2747parallel
Strand 4
A
2812 2817parallel
Strand 5
A
2838 2844parallel
Strand 6
A
2918 2923parallel
Strand 7
A
2946 2951parallel
Strand 8
B
2946 2951parallel
Strand 9
B
2918 2923parallel
Strand 10
B
2838 2844parallel
Strand 11
B
2812 2817parallel
Strand 12
B
2742 2747parallel
Strand 13
B
2771 2776parallel
Strand 14
B
2730 2734anti-parallel
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