Analysis of interatomic Contacts of Structural Units in PDB entry:
8W2T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8W2T entry

There are 2 chains in PDB entry 8W2T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	ASP 875	MET 1158
Q	ASP 875	MET 1158

There are 30 helices in PDB entry 8W2T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	875	886	Right-handed alpha
Helix 2	AA2	D	887	889	Right-handed 310
Helix 3	AA3	D	890	897	Right-handed alpha
Helix 4	AA4	D	900	905	Right-handed alpha
Helix 5	AA5	D	908	916	Right-handed alpha
Helix 6	AA6	D	919	935	Right-handed alpha
Helix 7	AA7	D	937	940	Right-handed 310
Helix 8	AA8	D	941	946	Right-handed alpha
Helix 9	AA9	D	962	975	Right-handed alpha
Helix 10	AB1	D	1002	1019	Right-handed alpha
Helix 11	AB2	D	1035	1043	Right-handed alpha
Helix 12	AB3	D	1045	1049	Right-handed 310
Helix 13	AB4	D	1064	1070	Right-handed alpha
Helix 14	AB5	D	1074	1078	Right-handed 310
Helix 15	AB6	D	1143	1145	Right-handed 310
Helix 16	AB7	Q	876	885	Right-handed alpha
Helix 17	AB8	Q	887	889	Right-handed 310
Helix 18	AB9	Q	890	897	Right-handed alpha
Helix 19	AC1	Q	900	905	Right-handed alpha
Helix 20	AC2	Q	908	915	Right-handed alpha
Helix 21	AC3	Q	919	935	Right-handed alpha
Helix 22	AC4	Q	937	940	Right-handed 310
Helix 23	AC5	Q	941	947	Right-handed alpha
Helix 24	AC6	Q	962	975	Right-handed alpha
Helix 25	AC7	Q	1002	1019	Right-handed alpha
Helix 26	AC8	Q	1035	1043	Right-handed alpha
Helix 27	AC9	Q	1045	1049	Right-handed 310
Helix 28	AD1	Q	1064	1070	Right-handed alpha
Helix 29	AD2	Q	1074	1078	Right-handed 310
Helix 30	AD3	Q	1143	1145	Right-handed 310

There are 4 sheets in PDB entry 8W2T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	954	957	first strand
Strand 2	D	992	1001	anti-parallel
Strand 3	D	1147	1157	anti-parallel
Strand 4	D	1094	1102	anti-parallel
Strand 5	D	1026	1031	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1059	1061	first strand
Strand 2	D	1138	1141	anti-parallel
Strand 3	D	1124	1127	anti-parallel
Strand 4	D	1106	1109	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	954	957	first strand
Strand 2	Q	991	1001	anti-parallel
Strand 3	Q	1147	1158	anti-parallel
Strand 4	Q	1094	1102	anti-parallel
Strand 5	Q	1026	1031	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	1059	1062	first strand
Strand 2	Q	1138	1141	anti-parallel
Strand 3	Q	1124	1127	anti-parallel
Strand 4	Q	1106	1109	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8W2T

Analysis of interatomic Contacts of Structural Units in PDB entry:
8W2T