Analysis of interatomic Contacts of Structural Units in PDB entry:
8W4O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8W4O entry

There are 3 chains in PDB entry 8W4O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
5
 ALA 37TRP 205
7
 PHE 23GLY 186
6
 PHE 36ASN 199
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 8W4O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
5
61 95Right-handed alpha
Helix 2
AA2
5
108 112Right-handed 310
Helix 3
AA3
5
116 138Right-handed alpha
Helix 4
AA4
5
158 189Right-handed alpha
Helix 5
AA5
5
192 199Right-handed alpha
Helix 6
AA6
5
200 202Right-handed 310
Helix 7
AA7
7
46 71Right-handed alpha
Helix 8
AA8
7
72 76Right-handed 310
Helix 9
AA9
7
103 119Right-handed alpha
Helix 10
AB1
7
126 130Right-handed 310
Helix 11
AB2
7
139 168Right-handed alpha
Helix 12
AB3
7
181 185Right-handed 310
Helix 13
AB4
6
59 86Right-handed alpha
Helix 14
AB5
6
87 89Right-handed 310
Helix 15
AB6
6
116 132Right-handed alpha
Helix 16
AB7
6
139 143Right-handed 310
Helix 17
AB8
6
149 181Right-handed alpha
Helix 18
AB9
6
194 198Right-handed 310
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There are no sheets in PDB entry 8W4O
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il