Analysis of interatomic Contacts of Structural Units in PDB entry:
8W4P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8W4P entry

There are 3 chains in PDB entry 8W4P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
p
 SER 35PRO 248
4
 UNK 8UNK 160
3
 GLU 33TYR 195
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 8W4P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
p
62 66Right-handed 310
Helix 2
AA2
p
83 108Right-handed alpha
Helix 3
AA3
p
131 139Right-handed alpha
Helix 4
AA4
p
140 165Right-handed alpha
Helix 5
AA5
p
169 173Right-handed 310
Helix 6
AA6
p
190 221Right-handed alpha
Helix 7
AA7
p
225 234Right-handed alpha
Helix 8
AA8
4
19 24Right-handed 310
Helix 9
AA9
4
25 53Right-handed alpha
Helix 10
AB1
4
84 102Right-handed alpha
Helix 11
AB2
4
103 105Right-handed 310
Helix 12
AB3
4
124 128Right-handed 310
Helix 13
AB4
4
129 160Right-handed alpha
Helix 14
AB5
3
58 86Right-handed alpha
Helix 15
AB6
3
98 102Right-handed 310
Helix 16
AB7
3
106 112Right-handed alpha
Helix 17
AB8
3
113 129Right-handed alpha
Helix 18
AB9
3
143 178Right-handed alpha
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There are no sheets in PDB entry 8W4P
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il