Analysis of interatomic Contacts of Structural Units in PDB entry:
8W5S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8W5S entry

There are 3 chains in PDB entry 8W5S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 188GLN 488
B
 ILE 188GLN 488
C
 ILE 188GLN 488
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 8W5S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
188 199Right-handed alpha
Helix 2
AA2
A
204 213Right-handed alpha
Helix 3
AA3
A
216 232Right-handed alpha
Helix 4
AA4
A
234 243Right-handed alpha
Helix 5
AA5
A
244 256Right-handed alpha
Helix 6
AA6
A
257 271Right-handed alpha
Helix 7
AA7
A
276 285Right-handed alpha
Helix 8
AA8
A
288 304Right-handed alpha
Helix 9
AA9
A
306 315Right-handed alpha
Helix 10
AB1
A
316 329Right-handed alpha
Helix 11
AB2
A
338 353Right-handed alpha
Helix 12
AB3
A
360 371Right-handed alpha
Helix 13
AB4
A
372 388Right-handed alpha
Helix 14
AB5
A
390 399Right-handed alpha
Helix 15
AB6
A
400 430Right-handed alpha
Helix 16
AB7
A
435 446Right-handed alpha
Helix 17
AB8
A
450 463Right-handed alpha
Helix 18
AB9
A
465 474Right-handed alpha
Helix 19
AC1
A
475 487Right-handed alpha
Helix 20
AC2
B
189 199Right-handed alpha
Helix 21
AC3
B
204 214Right-handed alpha
Helix 22
AC4
B
216 232Right-handed alpha
Helix 23
AC5
B
234 242Right-handed alpha
Helix 24
AC6
B
244 256Right-handed alpha
Helix 25
AC7
B
257 271Right-handed alpha
Helix 26
AC8
B
276 285Right-handed alpha
Helix 27
AC9
B
288 304Right-handed alpha
Helix 28
AD1
B
306 315Right-handed alpha
Helix 29
AD2
B
316 327Right-handed alpha
Helix 30
AD3
B
338 352Right-handed alpha
Helix 31
AD4
B
360 371Right-handed alpha
Helix 32
AD5
B
372 388Right-handed alpha
Helix 33
AD6
B
390 399Right-handed alpha
Helix 34
AD7
B
400 428Right-handed alpha
Helix 35
AD8
B
435 447Right-handed alpha
Helix 36
AD9
B
450 463Right-handed alpha
Helix 37
AE1
B
465 474Right-handed alpha
Helix 38
AE2
B
475 487Right-handed alpha
Helix 39
AE3
C
189 199Right-handed alpha
Helix 40
AE4
C
204 213Right-handed alpha
Helix 41
AE5
C
216 232Right-handed alpha
Helix 42
AE6
C
234 242Right-handed alpha
Helix 43
AE7
C
244 255Right-handed alpha
Helix 44
AE8
C
257 271Right-handed alpha
Helix 45
AE9
C
276 285Right-handed alpha
Helix 46
AF1
C
288 304Right-handed alpha
Helix 47
AF2
C
306 315Right-handed alpha
Helix 48
AF3
C
316 328Right-handed alpha
Helix 49
AF4
C
338 353Right-handed alpha
Helix 50
AF5
C
360 371Right-handed alpha
Helix 51
AF6
C
372 388Right-handed alpha
Helix 52
AF7
C
390 399Right-handed alpha
Helix 53
AF8
C
400 416Right-handed alpha
Helix 54
AF9
C
416 430Right-handed alpha
Helix 55
AG1
C
435 446Right-handed alpha
Helix 56
AG2
C
450 463Right-handed alpha
Helix 57
AG3
C
465 472Right-handed alpha
Helix 58
AG4
C
475 486Right-handed alpha
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There are no sheets in PDB entry 8W5S
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il