Analysis of interatomic Contacts of Structural Units in PDB entry:
8W6C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8W6C entry

There are 2 chains in PDB entry 8W6C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 578
B
 MET 1ALA 578
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 8W6C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 11Right-handed alpha
Helix 2
AA2
A
11 24Right-handed alpha
Helix 3
AA3
A
25 31Right-handed alpha
Helix 4
AA4
A
33 51Right-handed alpha
Helix 5
AA5
A
55 60Right-handed alpha
Helix 6
AA6
A
61 67Right-handed alpha
Helix 7
AA7
A
74 80Right-handed alpha
Helix 8
AA8
A
84 103Right-handed alpha
Helix 9
AA9
A
104 118Right-handed alpha
Helix 10
AB1
A
120 137Right-handed alpha
Helix 11
AB2
A
140 163Right-handed alpha
Helix 12
AB3
A
214 233Right-handed alpha
Helix 13
AB4
A
240 254Right-handed alpha
Helix 14
AB5
A
262 290Right-handed alpha
Helix 15
AB6
A
304 321Right-handed alpha
Helix 16
AB7
A
326 345Right-handed alpha
Helix 17
AB8
A
353 358Right-handed alpha
Helix 18
AB9
A
369 381Right-handed alpha
Helix 19
AC1
A
409 417Right-handed alpha
Helix 20
AC2
A
418 438Right-handed alpha
Helix 21
AC3
A
439 446Right-handed alpha
Helix 22
AC4
A
447 453Right-handed 310
Helix 23
AC5
A
455 471Right-handed alpha
Helix 24
AC6
A
475 494Right-handed alpha
Helix 25
AC7
A
501 509Right-handed alpha
Helix 26
AC8
A
519 525Right-handed alpha
Helix 27
AC9
A
532 557Right-handed alpha
Helix 28
AD1
A
559 564Right-handed alpha
Helix 29
AD2
A
569 573Right-handed 310
Helix 30
AD3
B
2 11Right-handed alpha
Helix 31
AD4
B
11 24Right-handed alpha
Helix 32
AD5
B
25 31Right-handed alpha
Helix 33
AD6
B
33 51Right-handed alpha
Helix 34
AD7
B
55 60Right-handed alpha
Helix 35
AD8
B
61 67Right-handed alpha
Helix 36
AD9
B
74 80Right-handed alpha
Helix 37
AE1
B
84 103Right-handed alpha
Helix 38
AE2
B
104 118Right-handed alpha
Helix 39
AE3
B
120 137Right-handed alpha
Helix 40
AE4
B
140 163Right-handed alpha
Helix 41
AE5
B
214 233Right-handed alpha
Helix 42
AE6
B
240 254Right-handed alpha
Helix 43
AE7
B
262 290Right-handed alpha
Helix 44
AE8
B
304 321Right-handed alpha
Helix 45
AE9
B
326 345Right-handed alpha
Helix 46
AF1
B
353 358Right-handed alpha
Helix 47
AF2
B
369 381Right-handed alpha
Helix 48
AF3
B
409 417Right-handed alpha
Helix 49
AF4
B
418 438Right-handed alpha
Helix 50
AF5
B
439 446Right-handed alpha
Helix 51
AF6
B
447 453Right-handed 310
Helix 52
AF7
B
455 471Right-handed alpha
Helix 53
AF8
B
475 494Right-handed alpha
Helix 54
AF9
B
501 509Right-handed alpha
Helix 55
AG1
B
519 525Right-handed alpha
Helix 56
AG2
B
532 557Right-handed alpha
Helix 57
AG3
B
559 564Right-handed alpha
Helix 58
AG4
B
569 573Right-handed 310
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There are no sheets in PDB entry 8W6C
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il