Analysis of interatomic Contacts of Structural Units in PDB entry:
8W6H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8W6H entry

There are 2 chains in PDB entry 8W6H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 9ALA 588
B
 VAL 9ALA 588
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 8W6H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 23Right-handed alpha
Helix 2
AA2
A
32 50Right-handed alpha
Helix 3
AA3
A
57 60Right-handed 310
Helix 4
AA4
A
61 70Right-handed alpha
Helix 5
AA5
A
83 102Right-handed alpha
Helix 6
AA6
A
106 116Right-handed alpha
Helix 7
AA7
A
121 134Right-handed alpha
Helix 8
AA8
A
139 160Right-handed alpha
Helix 9
AA9
A
236 251Right-handed alpha
Helix 10
AB1
A
260 271Right-handed alpha
Helix 11
AB2
A
280 308Right-handed alpha
Helix 12
AB3
A
334 339Right-handed alpha
Helix 13
AB4
A
344 364Right-handed alpha
Helix 14
AB5
A
384 394Right-handed alpha
Helix 15
AB6
A
423 431Right-handed alpha
Helix 16
AB7
A
433 452Right-handed alpha
Helix 17
AB8
A
453 461Right-handed alpha
Helix 18
AB9
A
462 468Right-handed 310
Helix 19
AC1
A
469 485Right-handed alpha
Helix 20
AC2
A
489 508Right-handed alpha
Helix 21
AC3
A
512 521Right-handed alpha
Helix 22
AC4
A
534 539Right-handed alpha
Helix 23
AC5
A
540 542Right-handed 310
Helix 24
AC6
A
547 572Right-handed alpha
Helix 25
AC7
A
573 578Right-handed alpha
Helix 26
AC8
B
15 23Right-handed alpha
Helix 27
AC9
B
32 50Right-handed alpha
Helix 28
AD1
B
57 60Right-handed 310
Helix 29
AD2
B
61 70Right-handed alpha
Helix 30
AD3
B
83 102Right-handed alpha
Helix 31
AD4
B
106 116Right-handed alpha
Helix 32
AD5
B
121 134Right-handed alpha
Helix 33
AD6
B
139 160Right-handed alpha
Helix 34
AD7
B
236 251Right-handed alpha
Helix 35
AD8
B
260 271Right-handed alpha
Helix 36
AD9
B
280 308Right-handed alpha
Helix 37
AE1
B
334 339Right-handed alpha
Helix 38
AE2
B
344 364Right-handed alpha
Helix 39
AE3
B
384 394Right-handed alpha
Helix 40
AE4
B
423 431Right-handed alpha
Helix 41
AE5
B
433 452Right-handed alpha
Helix 42
AE6
B
453 461Right-handed alpha
Helix 43
AE7
B
462 468Right-handed 310
Helix 44
AE8
B
469 485Right-handed alpha
Helix 45
AE9
B
489 508Right-handed alpha
Helix 46
AF1
B
512 521Right-handed alpha
Helix 47
AF2
B
534 539Right-handed alpha
Helix 48
AF3
B
540 542Right-handed 310
Helix 49
AF4
B
546 572Right-handed alpha
Helix 50
AF5
B
573 578Right-handed alpha
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There are 2 sheets in PDB entry 8W6H. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
400 402first strand
Strand 2
A
419 420anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
400 402first strand
Strand 2
B
419 420anti-parallel
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