Analysis of interatomic Contacts of Structural Units in PDB entry:
8W6N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8W6N entry

There are 2 chains in PDB entry 8W6N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 4MET 589
B
 LEU 8ALA 588
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 8W6N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 10Right-handed alpha
Helix 2
AA2
A
13 23Right-handed alpha
Helix 3
AA3
A
24 30Right-handed alpha
Helix 4
AA4
A
32 44Right-handed alpha
Helix 5
AA5
A
44 50Right-handed alpha
Helix 6
AA6
A
61 66Right-handed alpha
Helix 7
AA7
A
73 78Right-handed alpha
Helix 8
AA8
A
79 81Right-handed 310
Helix 9
AA9
A
84 93Right-handed alpha
Helix 10
AB1
A
96 101Right-handed alpha
Helix 11
AB2
A
108 117Right-handed alpha
Helix 12
AB3
A
125 130Right-handed alpha
Helix 13
AB4
A
130 135Right-handed alpha
Helix 14
AB5
A
139 145Right-handed alpha
Helix 15
AB6
A
146 161Right-handed alpha
Helix 16
AB7
A
236 251Right-handed alpha
Helix 17
AB8
A
252 254Right-handed 310
Helix 18
AB9
A
260 273Right-handed alpha
Helix 19
AC1
A
284 308Right-handed alpha
Helix 20
AC2
A
325 330Right-handed alpha
Helix 21
AC3
A
330 339Right-handed alpha
Helix 22
AC4
A
344 362Right-handed alpha
Helix 23
AC5
A
371 375Right-handed 310
Helix 24
AC6
A
384 394Right-handed alpha
Helix 25
AC7
A
395 397Right-handed 310
Helix 26
AC8
A
434 453Right-handed alpha
Helix 27
AC9
A
453 460Right-handed alpha
Helix 28
AD1
A
471 485Right-handed alpha
Helix 29
AD2
A
489 508Right-handed alpha
Helix 30
AD3
A
516 521Right-handed alpha
Helix 31
AD4
A
539 543Right-handed 310
Helix 32
AD5
A
547 569Right-handed alpha
Helix 33
AD6
B
13 18Right-handed alpha
Helix 34
AD7
B
33 38Right-handed alpha
Helix 35
AD8
B
41 50Right-handed alpha
Helix 36
AD9
B
65 70Right-handed alpha
Helix 37
AE1
B
73 78Right-handed alpha
Helix 38
AE2
B
79 82Right-handed 310
Helix 39
AE3
B
84 93Right-handed alpha
Helix 40
AE4
B
94 102Right-handed alpha
Helix 41
AE5
B
122 135Right-handed alpha
Helix 42
AE6
B
143 159Right-handed alpha
Helix 43
AE7
B
234 251Right-handed alpha
Helix 44
AE8
B
255 258Right-handed 310
Helix 45
AE9
B
259 271Right-handed alpha
Helix 46
AF1
B
280 289Right-handed alpha
Helix 47
AF2
B
292 306Right-handed alpha
Helix 48
AF3
B
326 338Right-handed alpha
Helix 49
AF4
B
344 360Right-handed alpha
Helix 50
AF5
B
388 394Right-handed alpha
Helix 51
AF6
B
432 447Right-handed alpha
Helix 52
AF7
B
453 462Right-handed alpha
Helix 53
AF8
B
469 485Right-handed alpha
Helix 54
AF9
B
489 508Right-handed alpha
Helix 55
AG1
B
511 522Right-handed alpha
Helix 56
AG2
B
523 525Right-handed 310
Helix 57
AG3
B
534 539Right-handed alpha
Helix 58
AG4
B
540 542Right-handed 310
Helix 59
AG5
B
546 572Right-handed alpha
Helix 60
AG6
B
573 578Right-handed alpha
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There are 2 sheets in PDB entry 8W6N. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
400 403first strand
Strand 2
A
418 420anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
400 402first strand
Strand 2
B
419 420anti-parallel
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