Analysis of interatomic Contacts of Structural Units in PDB entry:
8W6T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8W6T entry

There are 2 chains in PDB entry 8W6T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 4MET 589
B
 LEU 8ALA 588
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 8W6T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 10Right-handed alpha
Helix 2
AA2
A
10 22Right-handed alpha
Helix 3
AA3
A
24 30Right-handed alpha
Helix 4
AA4
A
32 50Right-handed alpha
Helix 5
AA5
A
54 59Right-handed alpha
Helix 6
AA6
A
61 66Right-handed alpha
Helix 7
AA7
A
73 78Right-handed alpha
Helix 8
AA8
A
79 81Right-handed 310
Helix 9
AA9
A
83 102Right-handed alpha
Helix 10
AB1
A
108 117Right-handed alpha
Helix 11
AB2
A
119 135Right-handed alpha
Helix 12
AB3
A
139 160Right-handed alpha
Helix 13
AB4
A
234 246Right-handed alpha
Helix 14
AB5
A
246 251Right-handed alpha
Helix 15
AB6
A
259 273Right-handed alpha
Helix 16
AB7
A
284 309Right-handed alpha
Helix 17
AB8
A
324 339Right-handed alpha
Helix 18
AB9
A
344 363Right-handed alpha
Helix 19
AC1
A
371 377Right-handed 310
Helix 20
AC2
A
384 394Right-handed alpha
Helix 21
AC3
A
424 431Right-handed alpha
Helix 22
AC4
A
432 453Right-handed alpha
Helix 23
AC5
A
453 460Right-handed alpha
Helix 24
AC6
A
469 485Right-handed alpha
Helix 25
AC7
A
489 508Right-handed alpha
Helix 26
AC8
A
515 522Right-handed alpha
Helix 27
AC9
A
534 539Right-handed alpha
Helix 28
AD1
A
540 543Right-handed 310
Helix 29
AD2
A
546 569Right-handed alpha
Helix 30
AD3
A
573 578Right-handed alpha
Helix 31
AD4
B
13 18Right-handed alpha
Helix 32
AD5
B
33 50Right-handed alpha
Helix 33
AD6
B
57 60Right-handed 310
Helix 34
AD7
B
61 69Right-handed alpha
Helix 35
AD8
B
73 79Right-handed alpha
Helix 36
AD9
B
80 82Right-handed 310
Helix 37
AE1
B
83 102Right-handed alpha
Helix 38
AE2
B
122 135Right-handed alpha
Helix 39
AE3
B
139 159Right-handed alpha
Helix 40
AE4
B
234 251Right-handed alpha
Helix 41
AE5
B
255 258Right-handed 310
Helix 42
AE6
B
259 271Right-handed alpha
Helix 43
AE7
B
281 308Right-handed alpha
Helix 44
AE8
B
326 338Right-handed alpha
Helix 45
AE9
B
344 360Right-handed alpha
Helix 46
AF1
B
371 375Right-handed 310
Helix 47
AF2
B
385 394Right-handed alpha
Helix 48
AF3
B
424 429Right-handed alpha
Helix 49
AF4
B
432 447Right-handed alpha
Helix 50
AF5
B
453 462Right-handed alpha
Helix 51
AF6
B
463 468Right-handed 310
Helix 52
AF7
B
469 485Right-handed alpha
Helix 53
AF8
B
489 508Right-handed alpha
Helix 54
AF9
B
511 522Right-handed alpha
Helix 55
AG1
B
523 525Right-handed 310
Helix 56
AG2
B
534 539Right-handed alpha
Helix 57
AG3
B
546 567Right-handed alpha
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There are 2 sheets in PDB entry 8W6T. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
400 403first strand
Strand 2
A
418 420anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
400 402first strand
Strand 2
B
419 420anti-parallel
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