Analysis of interatomic Contacts of Structural Units in PDB entry:
8W7G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8W7G entry

There is 1 chain in PDB entry 8W7G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 7TRP 404
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 8W7G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 31Right-handed alpha
Helix 2
AA2
A
49 59Right-handed alpha
Helix 3
AA3
A
68 72Right-handed 310
Helix 4
AA4
A
87 89Right-handed 310
Helix 5
AA5
A
90 102Right-handed alpha
Helix 6
AA6
A
103 106Right-handed 310
Helix 7
AA7
A
107 136Right-handed alpha
Helix 8
AA8
A
143 147Right-handed alpha
Helix 9
AA9
A
149 161Right-handed alpha
Helix 10
AB1
A
163 165Right-handed 310
Helix 11
AB2
A
166 178Right-handed alpha
Helix 12
AB3
A
183 207Right-handed alpha
Helix 13
AB4
A
211 223Right-handed alpha
Helix 14
AB5
A
227 243Right-handed alpha
Helix 15
AB6
A
243 260Right-handed alpha
Helix 16
AB7
A
260 270Right-handed alpha
Helix 17
AB8
A
270 286Right-handed alpha
Helix 18
AB9
A
317 322Right-handed alpha
Helix 19
AC1
A
348 352Right-handed 310
Helix 20
AC2
A
355 374Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 8W7G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 37first strand
Strand 2
A
43 47anti-parallel
Strand 3
A
313 316parallel
Strand 4
A
293 297anti-parallel
Strand 5
A
62 63anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 142first strand
Strand 2
A
401 403anti-parallel
Strand 3
A
378 379anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 303first strand
Strand 2
A
306 308anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il