Analysis of interatomic Contacts of Structural Units in PDB entry:
8W7L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8W7L entry

There are 4 chains in PDB entry 8W7L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4ILE 869
B
 PHE 5ILE 869
C
 GLN -1ASP 16
D
 VAL -1VAL 15
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 8W7L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
68 83Right-handed alpha
Helix 2
AA2
A
92 99Right-handed alpha
Helix 3
AA3
A
122 132Right-handed alpha
Helix 4
AA4
A
198 203Right-handed alpha
Helix 5
AA5
A
260 275Right-handed alpha
Helix 6
AA6
A
306 313Right-handed alpha
Helix 7
AA7
A
326 345Right-handed alpha
Helix 8
AA8
A
399 417Right-handed alpha
Helix 9
AA9
A
419 423Right-handed 310
Helix 10
AB1
A
429 445Right-handed alpha
Helix 11
AB2
A
447 463Right-handed alpha
Helix 12
AB3
A
489 502Right-handed alpha
Helix 13
AB4
A
502 512Right-handed alpha
Helix 14
AB5
A
537 549Right-handed alpha
Helix 15
AB6
A
558 570Right-handed alpha
Helix 16
AB7
A
571 573Right-handed 310
Helix 17
AB8
A
587 596Right-handed alpha
Helix 18
AB9
A
597 608Right-handed alpha
Helix 19
AC1
A
625 639Right-handed alpha
Helix 20
AC2
A
642 663Right-handed alpha
Helix 21
AC3
A
680 684Right-handed 310
Helix 22
AC4
A
686 690Right-handed 310
Helix 23
AC5
A
692 705Right-handed alpha
Helix 24
AC6
A
707 723Right-handed alpha
Helix 25
AC7
A
749 759Right-handed alpha
Helix 26
AC8
A
764 779Right-handed alpha
Helix 27
AC9
A
792 800Right-handed alpha
Helix 28
AD1
A
807 820Right-handed alpha
Helix 29
AD2
A
848 859Right-handed alpha
Helix 30
AD3
B
68 81Right-handed alpha
Helix 31
AD4
B
92 100Right-handed alpha
Helix 32
AD5
B
122 134Right-handed alpha
Helix 33
AD6
B
198 203Right-handed alpha
Helix 34
AD7
B
260 275Right-handed alpha
Helix 35
AD8
B
306 313Right-handed alpha
Helix 36
AD9
B
326 344Right-handed alpha
Helix 37
AE1
B
399 417Right-handed alpha
Helix 38
AE2
B
419 423Right-handed 310
Helix 39
AE3
B
429 445Right-handed alpha
Helix 40
AE4
B
447 464Right-handed alpha
Helix 41
AE5
B
488 512Right-handed alpha
Helix 42
AE6
B
522 526Right-handed 310
Helix 43
AE7
B
537 548Right-handed alpha
Helix 44
AE8
B
559 569Right-handed alpha
Helix 45
AE9
B
584 594Right-handed alpha
Helix 46
AF1
B
597 608Right-handed alpha
Helix 47
AF2
B
624 639Right-handed alpha
Helix 48
AF3
B
642 663Right-handed alpha
Helix 49
AF4
B
692 705Right-handed alpha
Helix 50
AF5
B
707 722Right-handed alpha
Helix 51
AF6
B
723 725Right-handed 310
Helix 52
AF7
B
749 759Right-handed alpha
Helix 53
AF8
B
764 770Right-handed alpha
Helix 54
AF9
B
770 779Right-handed alpha
Helix 55
AG1
B
792 800Right-handed alpha
Helix 56
AG2
B
807 820Right-handed alpha
Helix 57
AG3
B
848 859Right-handed alpha
Helix 58
AG4
D
4 8Right-handed 310
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There are 9 sheets in PDB entry 8W7L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 38first strand
Strand 2
A
43 48anti-parallel
Strand 3
A
87 90anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 115first strand
Strand 2
A
58 62anti-parallel
Strand 3
A
152 156anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 225first strand
Strand 2
A
230 236anti-parallel
Strand 3
A
242 248anti-parallel
Strand 4
A
293 299anti-parallel
Strand 5
A
284 290anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 305first strand
Strand 2
A
359 361anti-parallel
Strand 3
A
367 369anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
477 478first strand
Strand 2
A
823 826anti-parallel
Strand 3
A
829 832anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 38first strand
Strand 2
B
43 46anti-parallel
Strand 3
B
87 90anti-parallel
Strand 4
B
113 115anti-parallel
Strand 5
B
59 62anti-parallel
Strand 6
B
152 155anti-parallel
Strand 7
B
146 147anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
217 219first strand
Strand 2
B
232 236anti-parallel
Strand 3
B
243 248anti-parallel
Strand 4
B
293 299anti-parallel
Strand 5
B
284 290anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
304 305first strand
Strand 2
B
359 361anti-parallel
Strand 3
B
367 369anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
823 826first strand
Strand 2
B
829 832anti-parallel
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