Analysis of interatomic Contacts of Structural Units in PDB entry:
8W8G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8W8G entry

There are 8 chains in PDB entry 8W8G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 62LYS 267
B
 GLU 62LYS 267
C
 GLU 62THR 269
D
 GLU 62GLU 265
E
 SER 285ARG 297
F
 ARG 287ARG 297
G
 SER 285LYS 299
H
 SER 285ARG 297
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 8W8G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
62 93Right-handed alpha
Helix 2
AA2
A
94 112Right-handed alpha
Helix 3
AA3
A
116 134Right-handed alpha
Helix 4
AA4
A
149 159Right-handed alpha
Helix 5
AA5
A
166 186Right-handed alpha
Helix 6
AA6
A
189 201Right-handed alpha
Helix 7
AA7
A
210 221Right-handed alpha
Helix 8
AA8
A
225 231Right-handed alpha
Helix 9
AA9
A
232 251Right-handed alpha
Helix 10
AB1
A
254 267Right-handed alpha
Helix 11
AB2
B
63 93Right-handed alpha
Helix 12
AB3
B
94 111Right-handed alpha
Helix 13
AB4
B
116 133Right-handed alpha
Helix 14
AB5
B
149 161Right-handed alpha
Helix 15
AB6
B
166 187Right-handed alpha
Helix 16
AB7
B
189 202Right-handed alpha
Helix 17
AB8
B
210 219Right-handed alpha
Helix 18
AB9
B
225 231Right-handed alpha
Helix 19
AC1
B
232 251Right-handed alpha
Helix 20
AC2
B
254 266Right-handed alpha
Helix 21
AC3
C
63 93Right-handed alpha
Helix 22
AC4
C
94 111Right-handed alpha
Helix 23
AC5
C
116 134Right-handed alpha
Helix 24
AC6
C
149 159Right-handed alpha
Helix 25
AC7
C
166 187Right-handed alpha
Helix 26
AC8
C
189 202Right-handed alpha
Helix 27
AC9
C
203 206Right-handed 310
Helix 28
AD1
C
210 221Right-handed alpha
Helix 29
AD2
C
225 231Right-handed alpha
Helix 30
AD3
C
232 251Right-handed alpha
Helix 31
AD4
C
254 267Right-handed alpha
Helix 32
AD5
D
63 92Right-handed alpha
Helix 33
AD6
D
94 111Right-handed alpha
Helix 34
AD7
D
116 135Right-handed alpha
Helix 35
AD8
D
149 159Right-handed alpha
Helix 36
AD9
D
166 187Right-handed alpha
Helix 37
AE1
D
189 201Right-handed alpha
Helix 38
AE2
D
211 220Right-handed alpha
Helix 39
AE3
D
225 231Right-handed alpha
Helix 40
AE4
D
232 252Right-handed alpha
Helix 41
AE5
D
254 265Right-handed alpha
Helix 42
AE6
E
285 289Right-handed 310
Helix 43
AE7
G
285 289Right-handed 310
Helix 44
AE8
H
285 289Right-handed 310
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There are no sheets in PDB entry 8W8G
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il