Analysis of interatomic Contacts of Structural Units in PDB entry:
8W9V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8W9V entry

There are 2 chains in PDB entry 8W9V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 41VAL 533
B
 VAL 41VAL 533
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 8W9V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 65Right-handed alpha
Helix 2
AA2
A
75 88Right-handed alpha
Helix 3
AA3
A
101 115Right-handed alpha
Helix 4
AA4
A
116 127Right-handed alpha
Helix 5
AA5
A
179 216Right-handed alpha
Helix 6
AA6
A
216 227Right-handed alpha
Helix 7
AA7
A
229 244Right-handed alpha
Helix 8
AA8
A
254 258Right-handed 310
Helix 9
AA9
A
260 275Right-handed alpha
Helix 10
AB1
A
277 293Right-handed alpha
Helix 11
AB2
A
295 304Right-handed alpha
Helix 12
AB3
A
315 341Right-handed alpha
Helix 13
AB4
A
344 348Right-handed 310
Helix 14
AB5
A
351 367Right-handed alpha
Helix 15
AB6
A
380 393Right-handed alpha
Helix 16
AB7
A
422 427Right-handed alpha
Helix 17
AB8
A
429 445Right-handed alpha
Helix 18
AB9
A
445 452Right-handed alpha
Helix 19
AC1
A
457 470Right-handed alpha
Helix 20
AC2
A
479 485Right-handed alpha
Helix 21
AC3
A
498 503Right-handed 310
Helix 22
AC4
A
504 520Right-handed alpha
Helix 23
AC5
A
520 525Right-handed alpha
Helix 24
AC6
B
42 65Right-handed alpha
Helix 25
AC7
B
75 88Right-handed alpha
Helix 26
AC8
B
101 115Right-handed alpha
Helix 27
AC9
B
116 127Right-handed alpha
Helix 28
AD1
B
179 216Right-handed alpha
Helix 29
AD2
B
216 227Right-handed alpha
Helix 30
AD3
B
229 243Right-handed alpha
Helix 31
AD4
B
254 258Right-handed 310
Helix 32
AD5
B
260 275Right-handed alpha
Helix 33
AD6
B
277 293Right-handed alpha
Helix 34
AD7
B
295 304Right-handed alpha
Helix 35
AD8
B
315 341Right-handed alpha
Helix 36
AD9
B
344 348Right-handed 310
Helix 37
AE1
B
351 367Right-handed alpha
Helix 38
AE2
B
380 393Right-handed alpha
Helix 39
AE3
B
422 427Right-handed alpha
Helix 40
AE4
B
429 445Right-handed alpha
Helix 41
AE5
B
445 452Right-handed alpha
Helix 42
AE6
B
457 470Right-handed alpha
Helix 43
AE7
B
479 485Right-handed alpha
Helix 44
AE8
B
498 503Right-handed 310
Helix 45
AE9
B
504 520Right-handed alpha
Helix 46
AF1
B
520 525Right-handed alpha
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There are no sheets in PDB entry 8W9V
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il