Analysis of interatomic Contacts of Structural Units in PDB entry:
8W9Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8W9Y entry

There are 6 chains in PDB entry 8W9Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 144PRO 407
B
 ARG 144PRO 407
C
 ARG 144PRO 407
D
 ARG 144PRO 407
E
 ARG 144PRO 407
F
 ARG 144PRO 407
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 8W9Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
148 175Right-handed alpha
Helix 2
AA2
A
199 221Right-handed alpha
Helix 3
AA3
A
224 250Right-handed alpha
Helix 4
AA4
A
268 281Right-handed alpha
Helix 5
AA5
A
300 315Right-handed alpha
Helix 6
AA6
A
322 341Right-handed alpha
Helix 7
AA7
A
345 370Right-handed alpha
Helix 8
AA8
A
370 375Right-handed alpha
Helix 9
AA9
A
385 390Right-handed alpha
Helix 10
AB1
B
150 174Right-handed alpha
Helix 11
AB2
B
199 221Right-handed alpha
Helix 12
AB3
B
224 250Right-handed alpha
Helix 13
AB4
B
271 281Right-handed alpha
Helix 14
AB5
B
299 315Right-handed alpha
Helix 15
AB6
B
322 341Right-handed alpha
Helix 16
AB7
B
345 370Right-handed alpha
Helix 17
AB8
B
385 390Right-handed alpha
Helix 18
AB9
C
148 175Right-handed alpha
Helix 19
AC1
C
199 221Right-handed alpha
Helix 20
AC2
C
224 250Right-handed alpha
Helix 21
AC3
C
270 281Right-handed alpha
Helix 22
AC4
C
299 315Right-handed alpha
Helix 23
AC5
C
322 341Right-handed alpha
Helix 24
AC6
C
345 369Right-handed alpha
Helix 25
AC7
C
370 375Right-handed alpha
Helix 26
AC8
C
384 389Right-handed alpha
Helix 27
AC9
D
150 177Right-handed alpha
Helix 28
AD1
D
199 221Right-handed alpha
Helix 29
AD2
D
224 250Right-handed alpha
Helix 30
AD3
D
270 281Right-handed alpha
Helix 31
AD4
D
299 315Right-handed alpha
Helix 32
AD5
D
322 341Right-handed alpha
Helix 33
AD6
D
345 370Right-handed alpha
Helix 34
AD7
D
370 375Right-handed alpha
Helix 35
AD8
E
150 175Right-handed alpha
Helix 36
AD9
E
199 221Right-handed alpha
Helix 37
AE1
E
224 250Right-handed alpha
Helix 38
AE2
E
270 281Right-handed alpha
Helix 39
AE3
E
299 315Right-handed alpha
Helix 40
AE4
E
322 341Right-handed alpha
Helix 41
AE5
E
345 370Right-handed alpha
Helix 42
AE6
E
384 389Right-handed alpha
Helix 43
AE7
F
148 175Right-handed alpha
Helix 44
AE8
F
189 194Right-handed alpha
Helix 45
AE9
F
199 222Right-handed alpha
Helix 46
AF1
F
224 250Right-handed alpha
Helix 47
AF2
F
270 281Right-handed alpha
Helix 48
AF3
F
299 315Right-handed alpha
Helix 49
AF4
F
322 341Right-handed alpha
Helix 50
AF5
F
345 370Right-handed alpha
Helix 51
AF6
F
370 375Right-handed alpha
Helix 52
AF7
F
384 389Right-handed alpha
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There are no sheets in PDB entry 8W9Y
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