Analysis of interatomic Contacts of Structural Units in PDB entry:
8WBO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WBO entry

There is 1 chain in PDB entry 8WBO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 11GLY 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 8WBO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 39Right-handed alpha
Helix 2
AA2
A
40 42Right-handed 310
Helix 3
AA3
A
43 68Right-handed alpha
Helix 4
AA4
A
73 89Right-handed alpha
Helix 5
AA5
A
96 105Right-handed alpha
Helix 6
AA6
A
106 109Right-handed 310
Helix 7
AA7
A
115 125Right-handed alpha
Helix 8
AA8
A
136 148Right-handed alpha
Helix 9
AA9
A
157 161Right-handed alpha
Helix 10
AB1
A
166 178Right-handed alpha
Helix 11
AB2
A
180 182Right-handed 310
Helix 12
AB3
A
190 200Right-handed alpha
Helix 13
AB4
A
233 241Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8WBO.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 156first strand
Strand 2
A
128 133parallel
Strand 3
A
14 17parallel
Strand 4
A
184 188parallel
Strand 5
A
203 207parallel
Strand 6
A
229 231parallel
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