Analysis of interatomic Contacts of Structural Units in PDB entry:
8WC0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WC0 entry

There are 2 chains in PDB entry 8WC0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 4GLY 480
B
 VAL 3GLY 480
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 8WC0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 22Right-handed alpha
Helix 2
AA2
A
31 35Right-handed 310
Helix 3
AA3
A
41 46Right-handed alpha
Helix 4
AA4
A
46 53Right-handed alpha
Helix 5
AA5
A
62 75Right-handed alpha
Helix 6
AA6
A
77 85Right-handed alpha
Helix 7
AA7
A
85 91Right-handed alpha
Helix 8
AA8
A
95 104Right-handed alpha
Helix 9
AA9
A
116 125Right-handed alpha
Helix 10
AB1
A
134 140Right-handed 310
Helix 11
AB2
A
158 162Right-handed 310
Helix 12
AB3
A
165 176Right-handed alpha
Helix 13
AB4
A
176 188Right-handed alpha
Helix 14
AB5
A
203 210Right-handed alpha
Helix 15
AB6
A
214 218Right-handed 310
Helix 16
AB7
A
237 257Right-handed alpha
Helix 17
AB8
A
269 283Right-handed alpha
Helix 18
AB9
A
300 318Right-handed alpha
Helix 19
AC1
A
330 345Right-handed alpha
Helix 20
AC2
A
350 352Right-handed 310
Helix 21
AC3
A
368 383Right-handed alpha
Helix 22
AC4
A
403 416Right-handed alpha
Helix 23
AC5
A
424 426Right-handed 310
Helix 24
AC6
A
427 440Right-handed alpha
Helix 25
AC7
A
440 445Right-handed alpha
Helix 26
AC8
A
450 459Right-handed alpha
Helix 27
AC9
A
467 480Right-handed alpha
Helix 28
AD1
B
6 23Right-handed alpha
Helix 29
AD2
B
31 35Right-handed 310
Helix 30
AD3
B
41 46Right-handed alpha
Helix 31
AD4
B
46 52Right-handed alpha
Helix 32
AD5
B
62 75Right-handed alpha
Helix 33
AD6
B
77 85Right-handed alpha
Helix 34
AD7
B
85 91Right-handed alpha
Helix 35
AD8
B
95 104Right-handed alpha
Helix 36
AD9
B
116 125Right-handed alpha
Helix 37
AE1
B
134 140Right-handed 310
Helix 38
AE2
B
158 162Right-handed 310
Helix 39
AE3
B
165 176Right-handed alpha
Helix 40
AE4
B
176 188Right-handed alpha
Helix 41
AE5
B
203 209Right-handed alpha
Helix 42
AE6
B
210 212Right-handed 310
Helix 43
AE7
B
237 256Right-handed alpha
Helix 44
AE8
B
269 283Right-handed alpha
Helix 45
AE9
B
300 318Right-handed alpha
Helix 46
AF1
B
330 345Right-handed alpha
Helix 47
AF2
B
350 352Right-handed 310
Helix 48
AF3
B
368 383Right-handed alpha
Helix 49
AF4
B
403 416Right-handed alpha
Helix 50
AF5
B
424 426Right-handed 310
Helix 51
AF6
B
427 440Right-handed alpha
Helix 52
AF7
B
440 445Right-handed alpha
Helix 53
AF8
B
450 460Right-handed alpha
Helix 54
AF9
B
464 466Right-handed 310
Helix 55
AG1
B
467 480Right-handed alpha
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There are 6 sheets in PDB entry 8WC0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 132first strand
Strand 2
A
147 151parallel
Strand 3
A
108 111parallel
Strand 4
A
25 29parallel
Strand 5
A
191 195parallel
Strand 6
A
221 226parallel
Strand 7
A
260 265parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
354 355first strand
Strand 2
A
321 324parallel
Strand 3
A
286 292parallel
Strand 4
A
386 391parallel
Strand 5
A
419 422parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
393 396first strand
Strand 2
A
399 402anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
129 132first strand
Strand 2
B
147 151parallel
Strand 3
B
108 111parallel
Strand 4
B
25 29parallel
Strand 5
B
191 195parallel
Strand 6
B
221 226parallel
Strand 7
B
260 265parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
354 355first strand
Strand 2
B
321 324parallel
Strand 3
B
286 292parallel
Strand 4
B
386 391parallel
Strand 5
B
419 422parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
393 396first strand
Strand 2
B
399 402anti-parallel
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