Analysis of interatomic Contacts of Structural Units in PDB entry:
8WCI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WCI entry

There are 11 chains in PDB entry 8WCI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 156
B
 MET 1ALA 156
C
 MET 1ALA 156
D
 MET 1ALA 156
E
 MET 1ALA 156
F
 MET 1ALA 156
G
 MET 1ALA 156
H
 MET 1ALA 156
I
 MET 1ALA 156
J
 MET 1ALA 156
P
 ALA 2ASN 660
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 95 helices in PDB entry 8WCI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 8Right-handed alpha
Helix 2
AA2
A
10 46Right-handed alpha
Helix 3
AA3
A
48 50Right-handed 310
Helix 4
AA4
A
51 61Right-handed alpha
Helix 5
AA5
A
63 79Right-handed alpha
Helix 6
AA6
A
85 124Right-handed alpha
Helix 7
AA7
A
127 137Right-handed alpha
Helix 8
AA8
A
138 156Right-handed alpha
Helix 9
AA9
B
2 8Right-handed alpha
Helix 10
AB1
B
11 46Right-handed alpha
Helix 11
AB2
B
48 50Right-handed 310
Helix 12
AB3
B
51 61Right-handed alpha
Helix 13
AB4
B
63 79Right-handed alpha
Helix 14
AB5
B
85 124Right-handed alpha
Helix 15
AB6
B
127 137Right-handed alpha
Helix 16
AB7
B
138 156Right-handed alpha
Helix 17
AB8
C
2 8Right-handed alpha
Helix 18
AB9
C
11 46Right-handed alpha
Helix 19
AC1
C
48 50Right-handed 310
Helix 20
AC2
C
51 60Right-handed alpha
Helix 21
AC3
C
63 79Right-handed alpha
Helix 22
AC4
C
85 124Right-handed alpha
Helix 23
AC5
C
127 156Right-handed alpha
Helix 24
AC6
D
2 8Right-handed alpha
Helix 25
AC7
D
11 46Right-handed alpha
Helix 26
AC8
D
48 50Right-handed 310
Helix 27
AC9
D
51 61Right-handed alpha
Helix 28
AD1
D
63 79Right-handed alpha
Helix 29
AD2
D
85 124Right-handed alpha
Helix 30
AD3
D
127 137Right-handed alpha
Helix 31
AD4
D
138 156Right-handed alpha
Helix 32
AD5
E
2 8Right-handed alpha
Helix 33
AD6
E
11 46Right-handed alpha
Helix 34
AD7
E
48 50Right-handed 310
Helix 35
AD8
E
51 61Right-handed alpha
Helix 36
AD9
E
63 79Right-handed alpha
Helix 37
AE1
E
85 124Right-handed alpha
Helix 38
AE2
E
127 137Right-handed alpha
Helix 39
AE3
E
138 156Right-handed alpha
Helix 40
AE4
F
2 8Right-handed alpha
Helix 41
AE5
F
11 46Right-handed alpha
Helix 42
AE6
F
47 50Right-handed 310
Helix 43
AE7
F
51 61Right-handed alpha
Helix 44
AE8
F
63 79Right-handed alpha
Helix 45
AE9
F
85 124Right-handed alpha
Helix 46
AF1
F
127 137Right-handed alpha
Helix 47
AF2
F
138 156Right-handed alpha
Helix 48
AF3
G
2 8Right-handed alpha
Helix 49
AF4
G
11 46Right-handed alpha
Helix 50
AF5
G
48 50Right-handed 310
Helix 51
AF6
G
51 61Right-handed alpha
Helix 52
AF7
G
63 79Right-handed alpha
Helix 53
AF8
G
85 124Right-handed alpha
Helix 54
AF9
G
127 137Right-handed alpha
Helix 55
AG1
G
138 156Right-handed alpha
Helix 56
AG2
H
2 9Right-handed alpha
Helix 57
AG3
H
11 46Right-handed alpha
Helix 58
AG4
H
48 50Right-handed 310
Helix 59
AG5
H
51 61Right-handed alpha
Helix 60
AG6
H
63 79Right-handed alpha
Helix 61
AG7
H
85 124Right-handed alpha
Helix 62
AG8
H
127 137Right-handed alpha
Helix 63
AG9
H
138 156Right-handed alpha
Helix 64
AH1
I
2 8Right-handed alpha
Helix 65
AH2
I
11 46Right-handed alpha
Helix 66
AH3
I
48 50Right-handed 310
Helix 67
AH4
I
51 61Right-handed alpha
Helix 68
AH5
I
63 79Right-handed alpha
Helix 69
AH6
I
85 124Right-handed alpha
Helix 70
AH7
I
127 137Right-handed alpha
Helix 71
AH8
I
138 156Right-handed alpha
Helix 72
AH9
J
2 8Right-handed alpha
Helix 73
AI1
J
11 46Right-handed alpha
Helix 74
AI2
J
48 50Right-handed 310
Helix 75
AI3
J
51 61Right-handed alpha
Helix 76
AI4
J
63 78Right-handed alpha
Helix 77
AI5
J
85 124Right-handed alpha
Helix 78
AI6
J
127 137Right-handed alpha
Helix 79
AI7
J
138 156Right-handed alpha
Helix 80
AI8
P
17 29Right-handed alpha
Helix 81
AI9
P
42 48Right-handed alpha
Helix 82
AJ1
P
271 281Right-handed alpha
Helix 83
AJ2
P
304 315Right-handed alpha
Helix 84
AJ3
P
328 334Right-handed alpha
Helix 85
AJ4
P
346 348Right-handed 310
Helix 86
AJ5
P
349 357Right-handed alpha
Helix 87
AJ6
P
366 383Right-handed alpha
Helix 88
AJ7
P
384 401Right-handed alpha
Helix 89
AJ8
P
405 430Right-handed alpha
Helix 90
AJ9
P
456 483Right-handed alpha
Helix 91
AK1
P
563 571Right-handed alpha
Helix 92
AK2
P
572 593Right-handed alpha
Helix 93
AK3
P
596 601Right-handed alpha
Helix 94
AK4
P
603 635Right-handed alpha
Helix 95
AK5
P
635 640Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8WCI.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
31 33first strand
Strand 2
P
295 300anti-parallel
Strand 3
P
6 12anti-parallel
Strand 4
P
321 325anti-parallel
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