Analysis of interatomic Contacts of Structural Units in PDB entry:
8WCN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WCN entry

There are 2 chains in PDB entry 8WCN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 14VAL 392
B
 ASN 15VAL 392
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 8WCN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 24Right-handed alpha
Helix 2
AA2
A
31 46Right-handed alpha
Helix 3
AA3
A
46 72Right-handed alpha
Helix 4
AA4
A
77 99Right-handed alpha
Helix 5
AA5
A
100 102Right-handed 310
Helix 6
AA6
A
104 106Right-handed 310
Helix 7
AA7
A
107 112Right-handed alpha
Helix 8
AA8
A
114 136Right-handed alpha
Helix 9
AA9
A
144 152Right-handed alpha
Helix 10
AB1
A
160 182Right-handed alpha
Helix 11
AB2
A
187 232Right-handed alpha
Helix 12
AB3
A
240 259Right-handed alpha
Helix 13
AB4
A
271 280Right-handed alpha
Helix 14
AB5
A
280 298Right-handed alpha
Helix 15
AB6
A
322 340Right-handed alpha
Helix 16
AB7
A
367 384Right-handed alpha
Helix 17
AB8
B
16 24Right-handed alpha
Helix 18
AB9
B
31 46Right-handed alpha
Helix 19
AC1
B
46 72Right-handed alpha
Helix 20
AC2
B
77 99Right-handed alpha
Helix 21
AC3
B
99 104Right-handed alpha
Helix 22
AC4
B
105 109Right-handed 310
Helix 23
AC5
B
110 134Right-handed alpha
Helix 24
AC6
B
144 152Right-handed alpha
Helix 25
AC7
B
160 182Right-handed alpha
Helix 26
AC8
B
187 232Right-handed alpha
Helix 27
AC9
B
240 259Right-handed alpha
Helix 28
AD1
B
271 280Right-handed alpha
Helix 29
AD2
B
280 287Right-handed alpha
Helix 30
AD3
B
287 298Right-handed alpha
Helix 31
AD4
B
322 341Right-handed alpha
Helix 32
AD5
B
367 384Right-handed alpha
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There are 2 sheets in PDB entry 8WCN. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 310first strand
Strand 2
A
313 319anti-parallel
Strand 3
A
262 269anti-parallel
Strand 4
A
355 361anti-parallel
Strand 5
A
390 391parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
305 308first strand
Strand 2
B
313 319anti-parallel
Strand 3
B
262 269anti-parallel
Strand 4
B
355 362anti-parallel
Strand 5
B
390 391parallel
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