Analysis of interatomic Contacts of Structural Units in PDB entry:
8WCP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WCP entry

There are 9 chains in PDB entry 8WCP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 274HIS 329
D
 UNK 327UNK 336
H
 UNK 337UNK 345
B
 LYS 274HIS 329
E
 UNK 327UNK 336
G
 UNK 337UNK 345
C
 LYS 274HIS 329
F
 UNK 327UNK 336
I
 UNK 337UNK 345
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 8WCP

There are 6 sheets in PDB entry 8WCP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
275 280first strand
Strand 2
A
275 280parallel
Strand 3
C
275 280parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
284 288first strand
Strand 2
A
284 288parallel
Strand 3
C
284 288parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
297 302first strand
Strand 2
A
297 302parallel
Strand 3
C
297 302parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
306 310first strand
Strand 2
A
306 310parallel
Strand 3
C
306 310parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
317 323first strand
Strand 2
A
317 323parallel
Strand 3
C
317 323parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
326 328first strand
Strand 2
A
326 328parallel
Strand 3
C
326 328parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il