Analysis of interatomic Contacts of Structural Units in PDB entry:
8WDD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WDD entry

There are 2 chains in PDB entry 8WDD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 3ALA 583
B
 THR 2ALA 583
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 8WDD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 15Right-handed alpha
Helix 2
AA2
A
15 31Right-handed alpha
Helix 3
AA3
A
35 56Right-handed alpha
Helix 4
AA4
A
65 76Right-handed alpha
Helix 5
AA5
A
79 85Right-handed alpha
Helix 6
AA6
A
86 93Right-handed 310
Helix 7
AA7
A
96 104Right-handed alpha
Helix 8
AA8
A
118 129Right-handed alpha
Helix 9
AA9
A
129 145Right-handed alpha
Helix 10
AB1
A
149 168Right-handed alpha
Helix 11
AB2
A
172 206Right-handed alpha
Helix 12
AB3
A
206 222Right-handed alpha
Helix 13
AB4
A
226 245Right-handed alpha
Helix 14
AB5
A
248 265Right-handed alpha
Helix 15
AB6
A
266 270Right-handed 310
Helix 16
AB7
A
281 291Right-handed alpha
Helix 17
AB8
A
304 309Right-handed alpha
Helix 18
AB9
A
313 321Right-handed alpha
Helix 19
AC1
A
321 337Right-handed alpha
Helix 20
AC2
A
341 360Right-handed alpha
Helix 21
AC3
A
364 370Right-handed alpha
Helix 22
AC4
A
371 382Right-handed alpha
Helix 23
AC5
A
383 414Right-handed alpha
Helix 24
AC6
A
418 437Right-handed alpha
Helix 25
AC7
A
440 466Right-handed alpha
Helix 26
AC8
A
469 479Right-handed alpha
Helix 27
AC9
A
482 489Right-handed alpha
Helix 28
AD1
A
502 506Right-handed 310
Helix 29
AD2
A
509 514Right-handed 310
Helix 30
AD3
A
516 535Right-handed alpha
Helix 31
AD4
A
539 558Right-handed alpha
Helix 32
AD5
A
562 583Right-handed alpha
Helix 33
AD6
B
5 15Right-handed alpha
Helix 34
AD7
B
15 31Right-handed alpha
Helix 35
AD8
B
35 56Right-handed alpha
Helix 36
AD9
B
65 76Right-handed alpha
Helix 37
AE1
B
79 85Right-handed alpha
Helix 38
AE2
B
86 93Right-handed 310
Helix 39
AE3
B
96 104Right-handed alpha
Helix 40
AE4
B
118 129Right-handed alpha
Helix 41
AE5
B
129 145Right-handed alpha
Helix 42
AE6
B
149 168Right-handed alpha
Helix 43
AE7
B
172 206Right-handed alpha
Helix 44
AE8
B
206 222Right-handed alpha
Helix 45
AE9
B
226 245Right-handed alpha
Helix 46
AF1
B
248 265Right-handed alpha
Helix 47
AF2
B
266 271Right-handed alpha
Helix 48
AF3
B
281 291Right-handed alpha
Helix 49
AF4
B
304 309Right-handed alpha
Helix 50
AF5
B
313 321Right-handed alpha
Helix 51
AF6
B
321 337Right-handed alpha
Helix 52
AF7
B
341 360Right-handed alpha
Helix 53
AF8
B
364 370Right-handed alpha
Helix 54
AF9
B
371 414Right-handed alpha
Helix 55
AG1
B
418 437Right-handed alpha
Helix 56
AG2
B
440 464Right-handed alpha
Helix 57
AG3
B
469 479Right-handed alpha
Helix 58
AG4
B
482 489Right-handed alpha
Helix 59
AG5
B
502 507Right-handed 310
Helix 60
AG6
B
509 514Right-handed 310
Helix 61
AG7
B
516 535Right-handed alpha
Helix 62
AG8
B
539 558Right-handed alpha
Helix 63
AG9
B
562 583Right-handed alpha
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There are no sheets in PDB entry 8WDD
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