Analysis of interatomic Contacts of Structural Units in PDB entry:
8WE0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WE0 entry

There are 2 chains in PDB entry 8WE0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 19ALA 614
B
 THR 333PRO 527
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 8WE0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 53Right-handed alpha
Helix 2
AA2
A
55 81Right-handed alpha
Helix 3
AA3
A
92 101Right-handed alpha
Helix 4
AA4
A
109 129Right-handed alpha
Helix 5
AA5
A
147 152Right-handed alpha
Helix 6
AA6
A
158 175Right-handed alpha
Helix 7
AA7
A
182 194Right-handed alpha
Helix 8
AA8
A
198 204Right-handed alpha
Helix 9
AA9
A
220 230Right-handed alpha
Helix 10
AB1
A
233 250Right-handed alpha
Helix 11
AB2
A
252 256Right-handed 310
Helix 12
AB3
A
275 279Right-handed 310
Helix 13
AB4
A
293 300Right-handed alpha
Helix 14
AB5
A
303 318Right-handed alpha
Helix 15
AB6
A
324 331Right-handed alpha
Helix 16
AB7
A
365 385Right-handed alpha
Helix 17
AB8
A
389 393Right-handed 310
Helix 18
AB9
A
406 413Right-handed alpha
Helix 19
AC1
A
414 420Right-handed alpha
Helix 20
AC2
A
431 444Right-handed alpha
Helix 21
AC3
A
449 463Right-handed alpha
Helix 22
AC4
A
469 471Right-handed 310
Helix 23
AC5
A
472 484Right-handed alpha
Helix 24
AC6
A
499 502Right-handed 310
Helix 25
AC7
A
503 508Right-handed alpha
Helix 26
AC8
A
513 533Right-handed alpha
Helix 27
AC9
A
538 542Right-handed 310
Helix 28
AD1
A
547 559Right-handed alpha
Helix 29
AD2
A
565 575Right-handed alpha
Helix 30
AD3
A
581 588Right-handed alpha
Helix 31
AD4
A
588 599Right-handed alpha
Helix 32
AD5
B
364 370Right-handed alpha
Helix 33
AD6
B
405 410Right-handed 310
Helix 34
AD7
B
416 422Right-handed alpha
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There are 5 sheets in PDB entry 8WE0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
487 488parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 352first strand
Strand 2
A
355 359anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
355 356first strand
Strand 2
B
397 403anti-parallel
Strand 3
B
507 513anti-parallel
Strand 4
B
433 437anti-parallel
Strand 5
B
376 377anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
452 453first strand
Strand 2
B
493 494anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
473 474first strand
Strand 2
B
488 489anti-parallel
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