Analysis of interatomic Contacts of Structural Units in PDB entry:
8WE7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8WE7 entry

There are 4 chains in PDB entry 8WE7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 118	LEU 1649
D	PHE 27	GLY 1076
C	GLU 38	HIS 361
B	ARG 1	LYS 60

There are106 helices in PDB entry 8WE7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	123	144	Right-handed alpha
Helix 2	AA2	A	147	151	Right-handed 310
Helix 3	AA3	A	153	182	Right-handed alpha
Helix 4	AA4	A	194	217	Right-handed alpha
Helix 5	AA5	A	233	237	Right-handed alpha
Helix 6	AA6	A	238	241	Right-handed 310
Helix 7	AA7	A	242	249	Right-handed alpha
Helix 8	AA8	A	251	266	Right-handed alpha
Helix 9	AA9	A	269	277	Right-handed alpha
Helix 10	AB1	A	280	290	Right-handed alpha
Helix 11	AB2	A	354	361	Right-handed alpha
Helix 12	AB3	A	364	377	Right-handed alpha
Helix 13	AB4	A	381	386	Right-handed alpha
Helix 14	AB5	A	396	417	Right-handed alpha
Helix 15	AB6	A	419	447	Right-handed alpha
Helix 16	AB7	A	514	522	Right-handed alpha
Helix 17	AB8	A	524	543	Right-handed alpha
Helix 18	AB9	A	549	579	Right-handed alpha
Helix 19	AC1	A	580	586	Right-handed alpha
Helix 20	AC2	A	586	602	Right-handed alpha
Helix 21	AC3	A	604	609	Right-handed 310
Helix 22	AC4	A	618	623	Right-handed 310
Helix 23	AC5	A	624	630	Right-handed alpha
Helix 24	AC6	A	633	647	Right-handed alpha
Helix 25	AC7	A	647	673	Right-handed alpha
Helix 26	AC8	A	691	704	Right-handed alpha
Helix 27	AC9	A	707	719	Right-handed alpha
Helix 28	AD1	A	725	728	Right-handed 310
Helix 29	AD2	A	729	767	Right-handed alpha
Helix 30	AD3	A	767	775	Right-handed alpha
Helix 31	AD4	A	776	783	Right-handed alpha
Helix 32	AD5	A	901	919	Right-handed alpha
Helix 33	AD6	A	928	953	Right-handed alpha
Helix 34	AD7	A	958	973	Right-handed alpha
Helix 35	AD8	A	987	1004	Right-handed alpha
Helix 36	AD9	A	1013	1018	Right-handed alpha
Helix 37	AE1	A	1019	1022	Right-handed 310
Helix 38	AE2	A	1023	1028	Right-handed alpha
Helix 39	AE3	A	1034	1069	Right-handed alpha
Helix 40	AE4	A	1098	1100	Right-handed 310
Helix 41	AE5	A	1120	1133	Right-handed alpha
Helix 42	AE6	A	1136	1145	Right-handed alpha
Helix 43	AE7	A	1162	1173	Right-handed alpha
Helix 44	AE8	A	1175	1192	Right-handed alpha
Helix 45	AE9	A	1193	1197	Right-handed 310
Helix 46	AF1	A	1205	1215	Right-handed alpha
Helix 47	AF2	A	1227	1237	Right-handed alpha
Helix 48	AF3	A	1240	1257	Right-handed alpha
Helix 49	AF4	A	1264	1298	Right-handed alpha
Helix 50	AF5	A	1301	1322	Right-handed alpha
Helix 51	AF6	A	1373	1377	Right-handed alpha
Helix 52	AF7	A	1379	1390	Right-handed alpha
Helix 53	AF8	A	1391	1408	Right-handed alpha
Helix 54	AF9	A	1411	1430	Right-handed alpha
Helix 55	AG1	A	1449	1462	Right-handed alpha
Helix 56	AG2	A	1465	1473	Right-handed alpha
Helix 57	AG3	A	1499	1526	Right-handed alpha
Helix 58	AG4	A	1526	1531	Right-handed alpha
Helix 59	AG5	A	1538	1551	Right-handed alpha
Helix 60	AG6	A	1563	1572	Right-handed alpha
Helix 61	AG7	A	1585	1594	Right-handed alpha
Helix 62	AG8	A	1605	1618	Right-handed alpha
Helix 63	AG9	A	1625	1633	Right-handed alpha
Helix 64	AH1	A	1645	1649	Right-handed 310
Helix 65	AH2	D	28	53	Right-handed alpha
Helix 66	AH3	D	53	64	Right-handed alpha
Helix 67	AH4	D	74	109	Right-handed alpha
Helix 68	AH5	D	178	186	Right-handed alpha
Helix 69	AH6	D	189	200	Right-handed alpha
Helix 70	AH7	D	237	240	Right-handed 310
Helix 71	AH8	D	241	249	Right-handed alpha
Helix 72	AH9	D	261	265	Right-handed 310
Helix 73	AI1	D	266	280	Right-handed alpha
Helix 74	AI2	D	281	283	Right-handed 310
Helix 75	AI3	D	313	318	Right-handed alpha
Helix 76	AI4	D	332	344	Right-handed alpha
Helix 77	AI5	D	371	376	Right-handed alpha
Helix 78	AI6	D	396	406	Right-handed alpha
Helix 79	AI7	D	418	423	Right-handed alpha
Helix 80	AI8	D	425	430	Right-handed alpha
Helix 81	AI9	D	431	436	Right-handed alpha
Helix 82	AJ1	D	494	500	Right-handed alpha
Helix 83	AJ2	D	569	581	Right-handed alpha
Helix 84	AJ3	D	639	644	Right-handed alpha
Helix 85	AJ4	D	675	688	Right-handed alpha
Helix 86	AJ5	D	699	717	Right-handed alpha
Helix 87	AJ6	D	718	723	Right-handed alpha
Helix 88	AJ7	D	746	751	Right-handed 310
Helix 89	AJ8	D	757	760	Right-handed 310
Helix 90	AJ9	D	761	770	Right-handed alpha
Helix 91	AK1	D	818	827	Right-handed alpha
Helix 92	AK2	D	879	889	Right-handed alpha
Helix 93	AK3	D	1021	1024	Right-handed 310
Helix 94	AK4	D	1042	1047	Right-handed alpha
Helix 95	AK5	C	39	53	Right-handed alpha
Helix 96	AK6	C	120	128	Right-handed alpha
Helix 97	AK7	C	129	134	Right-handed 310
Helix 98	AK8	C	191	200	Right-handed alpha
Helix 99	AK9	C	202	208	Right-handed alpha
Helix 100	AL1	C	240	245	Right-handed alpha
Helix 101	AL2	C	252	262	Right-handed alpha
Helix 102	AL3	C	278	283	Right-handed 310
Helix 103	AL4	C	296	305	Right-handed alpha
Helix 104	AL5	C	310	314	Right-handed 310
Helix 105	AL6	C	315	324	Right-handed alpha
Helix 106	AL7	C	341	359	Right-handed alpha

There are 20 sheets in PDB entry 8WE7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	297	298	first strand
Strand 2	A	332	333	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1076	1078	first strand
Strand 2	A	1111	1113	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1092	1096	first strand
Strand 2	A	1104	1108	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	68	72	first strand
Strand 2	D	629	633	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	122	123	first strand
Strand 2	D	142	143	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	125	126	first strand
Strand 2	D	165	167	parallel
Strand 3	D	215	218	anti-parallel
Strand 4	D	206	210	anti-parallel
Strand 5	D	484	493	anti-parallel
Strand 6	D	458	461	anti-parallel
Strand 7	D	450	451	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	125	126	first strand
Strand 2	D	165	167	parallel
Strand 3	D	215	218	anti-parallel
Strand 4	D	206	210	anti-parallel
Strand 5	D	484	493	anti-parallel
Strand 6	D	465	467	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	150	151	first strand
Strand 2	D	158	159	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	298	300	first strand
Strand 2	D	288	294	anti-parallel
Strand 3	D	308	309	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	298	300	first strand
Strand 2	D	288	294	anti-parallel
Strand 3	D	255	259	parallel
Strand 4	D	357	362	parallel
Strand 5	D	383	389	parallel
Strand 6	D	409	413	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	521	523	first strand
Strand 2	D	512	515	anti-parallel
Strand 3	D	618	621	anti-parallel
Strand 4	D	608	611	anti-parallel
Strand 5	D	584	585	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	588	593	first strand
Strand 2	D	600	605	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	658	659	first strand
Strand 2	D	742	743	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	732	735	first strand
Strand 2	D	811	816	anti-parallel
Strand 3	D	792	795	anti-parallel
Strand 4	D	774	776	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	859	861	first strand
Strand 2	D	848	854	anti-parallel
Strand 3	D	1013	1019	anti-parallel
Strand 4	D	1000	1007	anti-parallel
Strand 5	D	993	995	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	892	894	first strand
Strand 2	D	981	983	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	897	904	first strand
Strand 2	D	972	978	anti-parallel
Strand 3	D	1036	1038	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	103	105	first strand
Strand 2	C	117	119	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	180	183	first strand
Strand 2	C	288	292	parallel
Strand 3	C	335	337	parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	37	first strand
Strand 2	B	23	26	anti-parallel
Strand 3	B	49	52	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8WE7

Analysis of interatomic Contacts of Structural Units in PDB entry:
8WE7