Analysis of interatomic Contacts of Structural Units in PDB entry:
8WEU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WEU entry

There is 1 chain in PDB entry 8WEU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 485
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 8WEU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 7Right-handed 310
Helix 2
AA2
A
8 15Right-handed alpha
Helix 3
AA3
A
32 49Right-handed alpha
Helix 4
AA4
A
64 77Right-handed alpha
Helix 5
AA5
A
89 101Right-handed alpha
Helix 6
AA6
A
111 117Right-handed alpha
Helix 7
AA7
A
168 182Right-handed alpha
Helix 8
AA8
A
198 205Right-handed alpha
Helix 9
AA9
A
205 213Right-handed alpha
Helix 10
AB1
A
223 234Right-handed alpha
Helix 11
AB2
A
242 252Right-handed alpha
Helix 12
AB3
A
274 283Right-handed alpha
Helix 13
AB4
A
295 298Right-handed 310
Helix 14
AB5
A
357 364Right-handed alpha
Helix 15
AB6
A
391 393Right-handed 310
Helix 16
AB7
A
402 411Right-handed alpha
Helix 17
AB8
A
446 456Right-handed alpha
Helix 18
AB9
A
457 458Right-handed 310
Helix 19
AC1
A
459 463Right-handed 310
Helix 20
AC2
A
480 485Right-handed alpha
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There are 7 sheets in PDB entry 8WEU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 31first strand
Strand 2
A
21 25anti-parallel
Strand 3
A
215 218parallel
Strand 4
A
189 192parallel
Strand 5
A
238 241parallel
Strand 6
A
265 268parallel
Strand 7
A
288 293parallel
Strand 8
A
300 304anti-parallel
Strand 9
A
318 319anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 83first strand
Strand 2
A
56 60parallel
Strand 3
A
104 107parallel
Strand 4
A
124 127parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 153first strand
Strand 2
A
163 167anti-parallel
Strand 3
A
353 354anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 328first strand
Strand 2
A
341 346anti-parallel
Strand 3
A
369 378anti-parallel
Strand 4
A
365 366anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 328first strand
Strand 2
A
341 346anti-parallel
Strand 3
A
369 378anti-parallel
Strand 4
A
384 389anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
394 396first strand
Strand 2
A
399 401anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
416 426first strand
Strand 2
A
430 439anti-parallel
Strand 3
A
466 469parallel
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