Analysis of interatomic Contacts of Structural Units in PDB entry:
8WFJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WFJ entry

There is 1 chain in PDB entry 8WFJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 54GLY 601
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 28 helices in PDB entry 8WFJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
54 64Right-handed alpha
Helix 2
AA2
A
65 70Right-handed alpha
Helix 3
AA3
A
70 80Right-handed alpha
Helix 4
AA4
A
81 95Right-handed alpha
Helix 5
AA5
A
96 110Right-handed alpha
Helix 6
AA6
A
121 123Right-handed 310
Helix 7
AA7
A
124 141Right-handed alpha
Helix 8
AA8
A
141 155Right-handed alpha
Helix 9
AA9
A
209 218Right-handed alpha
Helix 10
AB1
A
233 253Right-handed alpha
Helix 11
AB2
A
267 279Right-handed alpha
Helix 12
AB3
A
287 295Right-handed alpha
Helix 13
AB4
A
303 317Right-handed alpha
Helix 14
AB5
A
323 331Right-handed alpha
Helix 15
AB6
A
337 372Right-handed alpha
Helix 16
AB7
A
374 378Right-handed 310
Helix 17
AB8
A
389 397Right-handed alpha
Helix 18
AB9
A
399 433Right-handed alpha
Helix 19
AC1
A
442 458Right-handed alpha
Helix 20
AC2
A
459 463Right-handed 310
Helix 21
AC3
A
465 495Right-handed alpha
Helix 22
AC4
A
498 510Right-handed alpha
Helix 23
AC5
A
515 524Right-handed alpha
Helix 24
AC6
A
524 537Right-handed alpha
Helix 25
AC7
A
543 547Right-handed 310
Helix 26
AC8
A
552 566Right-handed alpha
Helix 27
AC9
A
568 581Right-handed alpha
Helix 28
AD1
A
587 595Right-handed alpha
Back to top of page
There are no sheets in PDB entry 8WFJ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il