Analysis of interatomic Contacts of Structural Units in PDB entry:
8WFN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8WFN entry

There are 8 chains in PDB entry 8WFN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 23	ILE 1005
B	LEU 22	ILE 1005
C	VAL 4	GLU 236
D	ILE 5	GLU 236
E	LEU 22	ASP 777
F	VAL 11	ILE 235
G	LEU 22	HIS 786
H	ILE 5	ASP 234

There are208 helices in PDB entry 8WFN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	23	39	Right-handed alpha
Helix 2	AA2	A	48	54	Right-handed alpha
Helix 3	AA3	A	58	72	Right-handed alpha
Helix 4	AA4	A	82	95	Right-handed alpha
Helix 5	AA5	A	96	106	Right-handed alpha
Helix 6	AA6	A	115	124	Right-handed alpha
Helix 7	AA7	A	136	145	Right-handed alpha
Helix 8	AA8	A	154	158	Right-handed 310
Helix 9	AA9	A	179	183	Right-handed 310
Helix 10	AB1	A	186	192	Right-handed alpha
Helix 11	AB2	A	192	197	Right-handed alpha
Helix 12	AB3	A	197	211	Right-handed alpha
Helix 13	AB4	A	222	237	Right-handed alpha
Helix 14	AB5	A	238	240	Right-handed 310
Helix 15	AB6	A	254	265	Right-handed alpha
Helix 16	AB7	A	281	296	Right-handed alpha
Helix 17	AB8	A	298	302	Right-handed 310
Helix 18	AB9	A	304	316	Right-handed alpha
Helix 19	AC1	A	317	321	Right-handed 310
Helix 20	AC2	A	327	333	Right-handed 310
Helix 21	AC3	A	355	366	Right-handed alpha
Helix 22	AC4	A	366	371	Right-handed alpha
Helix 23	AC5	A	374	392	Right-handed alpha
Helix 24	AC6	A	411	416	Right-handed alpha
Helix 25	AC7	A	417	427	Right-handed alpha
Helix 26	AC8	A	431	446	Right-handed alpha
Helix 27	AC9	A	447	466	Right-handed alpha
Helix 28	AD1	A	467	493	Right-handed alpha
Helix 29	AD2	A	494	501	Right-handed alpha
Helix 30	AD3	A	508	519	Right-handed alpha
Helix 31	AD4	A	525	531	Right-handed alpha
Helix 32	AD5	A	532	539	Right-handed alpha
Helix 33	AD6	A	540	546	Right-handed 310
Helix 34	AD7	A	551	572	Right-handed alpha
Helix 35	AD8	A	579	598	Right-handed alpha
Helix 36	AD9	A	600	604	Right-handed 310
Helix 37	AE1	A	605	629	Right-handed alpha
Helix 38	AE2	A	648	658	Right-handed alpha
Helix 39	AE3	A	660	670	Right-handed alpha
Helix 40	AE4	A	672	676	Right-handed 310
Helix 41	AE5	A	680	701	Right-handed alpha
Helix 42	AE6	A	705	723	Right-handed alpha
Helix 43	AE7	A	724	726	Right-handed 310
Helix 44	AE8	A	729	742	Right-handed alpha
Helix 45	AE9	A	750	765	Right-handed alpha
Helix 46	AF1	A	768	786	Right-handed alpha
Helix 47	AF2	A	800	812	Right-handed alpha
Helix 48	AF3	A	817	826	Right-handed alpha
Helix 49	AF4	A	831	840	Right-handed alpha
Helix 50	AF5	A	841	845	Right-handed 310
Helix 51	AF6	A	846	856	Right-handed alpha
Helix 52	AF7	A	861	871	Right-handed alpha
Helix 53	AF8	A	878	900	Right-handed alpha
Helix 54	AF9	A	911	922	Right-handed alpha
Helix 55	AG1	A	927	933	Right-handed alpha
Helix 56	AG2	A	937	945	Right-handed alpha
Helix 57	AG3	A	950	954	Right-handed 310
Helix 58	AG4	A	955	962	Right-handed 310
Helix 59	AG5	A	963	972	Right-handed alpha
Helix 60	AG6	A	973	990	Right-handed alpha
Helix 61	AG7	A	993	1005	Right-handed alpha
Helix 62	AG8	B	23	40	Right-handed alpha
Helix 63	AG9	B	48	54	Right-handed alpha
Helix 64	AH1	B	58	72	Right-handed alpha
Helix 65	AH2	B	80	85	Right-handed alpha
Helix 66	AH3	B	86	96	Right-handed alpha
Helix 67	AH4	B	97	108	Right-handed alpha
Helix 68	AH5	B	115	123	Right-handed alpha
Helix 69	AH6	B	136	146	Right-handed alpha
Helix 70	AH7	B	154	159	Right-handed 310
Helix 71	AH8	B	186	197	Right-handed alpha
Helix 72	AH9	B	197	211	Right-handed alpha
Helix 73	AI1	B	222	237	Right-handed alpha
Helix 74	AI2	B	238	240	Right-handed 310
Helix 75	AI3	B	254	265	Right-handed alpha
Helix 76	AI4	B	271	275	Right-handed alpha
Helix 77	AI5	B	281	295	Right-handed alpha
Helix 78	AI6	B	297	302	Right-handed alpha
Helix 79	AI7	B	304	317	Right-handed alpha
Helix 80	AI8	B	318	320	Right-handed 310
Helix 81	AI9	B	326	333	Right-handed 310
Helix 82	AJ1	B	355	366	Right-handed alpha
Helix 83	AJ2	B	366	372	Right-handed alpha
Helix 84	AJ3	B	374	392	Right-handed alpha
Helix 85	AJ4	B	417	427	Right-handed alpha
Helix 86	AJ5	B	431	445	Right-handed alpha
Helix 87	AJ6	B	447	462	Right-handed alpha
Helix 88	AJ7	B	463	465	Right-handed 310
Helix 89	AJ8	B	467	494	Right-handed alpha
Helix 90	AJ9	B	494	501	Right-handed alpha
Helix 91	AK1	B	508	519	Right-handed alpha
Helix 92	AK2	B	525	531	Right-handed alpha
Helix 93	AK3	B	532	540	Right-handed alpha
Helix 94	AK4	B	541	546	Right-handed 310
Helix 95	AK5	B	551	570	Right-handed alpha
Helix 96	AK6	B	579	598	Right-handed alpha
Helix 97	AK7	B	600	604	Right-handed 310
Helix 98	AK8	B	605	629	Right-handed alpha
Helix 99	AK9	B	632	638	Right-handed alpha
Helix 100	AL1	B	648	658	Right-handed alpha
Helix 101	AL2	B	660	671	Right-handed alpha
Helix 102	AL3	B	672	676	Right-handed 310
Helix 103	AL4	B	680	701	Right-handed alpha
Helix 104	AL5	B	705	723	Right-handed alpha
Helix 105	AL6	B	724	726	Right-handed 310
Helix 106	AL7	B	729	743	Right-handed alpha
Helix 107	AL8	B	750	765	Right-handed alpha
Helix 108	AL9	B	768	786	Right-handed alpha
Helix 109	AM1	B	801	812	Right-handed alpha
Helix 110	AM2	B	818	825	Right-handed alpha
Helix 111	AM3	B	833	841	Right-handed alpha
Helix 112	AM4	B	848	857	Right-handed alpha
Helix 113	AM5	B	862	871	Right-handed alpha
Helix 114	AM6	B	878	900	Right-handed alpha
Helix 115	AM7	B	911	922	Right-handed alpha
Helix 116	AM8	B	937	945	Right-handed alpha
Helix 117	AM9	B	950	954	Right-handed 310
Helix 118	AN1	B	955	961	Right-handed alpha
Helix 119	AN2	B	963	972	Right-handed alpha
Helix 120	AN3	B	974	991	Right-handed alpha
Helix 121	AN4	B	994	1004	Right-handed alpha
Helix 122	AN5	C	69	74	Right-handed alpha
Helix 123	AN6	D	70	74	Right-handed 310
Helix 124	AN7	E	23	39	Right-handed alpha
Helix 125	AN8	E	48	54	Right-handed alpha
Helix 126	AN9	E	58	71	Right-handed alpha
Helix 127	AO1	E	81	94	Right-handed alpha
Helix 128	AO2	E	96	108	Right-handed alpha
Helix 129	AO3	E	115	125	Right-handed alpha
Helix 130	AO4	E	136	145	Right-handed alpha
Helix 131	AO5	E	186	192	Right-handed alpha
Helix 132	AO6	E	192	197	Right-handed alpha
Helix 133	AO7	E	197	211	Right-handed alpha
Helix 134	AO8	E	223	237	Right-handed alpha
Helix 135	AO9	E	238	240	Right-handed 310
Helix 136	AP1	E	254	265	Right-handed alpha
Helix 137	AP2	E	270	275	Right-handed alpha
Helix 138	AP3	E	278	280	Right-handed 310
Helix 139	AP4	E	281	295	Right-handed alpha
Helix 140	AP5	E	305	317	Right-handed alpha
Helix 141	AP6	E	318	322	Right-handed 310
Helix 142	AP7	E	328	332	Right-handed 310
Helix 143	AP8	E	356	366	Right-handed alpha
Helix 144	AP9	E	367	372	Right-handed alpha
Helix 145	AQ1	E	376	392	Right-handed alpha
Helix 146	AQ2	E	411	416	Right-handed alpha
Helix 147	AQ3	E	417	425	Right-handed alpha
Helix 148	AQ4	E	432	444	Right-handed alpha
Helix 149	AQ5	E	448	457	Right-handed alpha
Helix 150	AQ6	E	467	491	Right-handed alpha
Helix 151	AQ7	E	494	499	Right-handed alpha
Helix 152	AQ8	E	534	539	Right-handed alpha
Helix 153	AQ9	E	541	545	Right-handed 310
Helix 154	AR1	E	551	572	Right-handed alpha
Helix 155	AR2	E	579	598	Right-handed alpha
Helix 156	AR3	E	600	604	Right-handed 310
Helix 157	AR4	E	605	626	Right-handed alpha
Helix 158	AR5	E	648	658	Right-handed alpha
Helix 159	AR6	E	660	670	Right-handed alpha
Helix 160	AR7	E	680	689	Right-handed alpha
Helix 161	AR8	E	692	698	Right-handed alpha
Helix 162	AR9	E	707	724	Right-handed alpha
Helix 163	AS1	E	730	742	Right-handed alpha
Helix 164	AS2	E	750	764	Right-handed alpha
Helix 165	AS3	E	768	777	Right-handed alpha
Helix 166	AS4	G	23	40	Right-handed alpha
Helix 167	AS5	G	48	54	Right-handed alpha
Helix 168	AS6	G	58	72	Right-handed alpha
Helix 169	AS7	G	81	94	Right-handed alpha
Helix 170	AS8	G	96	108	Right-handed alpha
Helix 171	AS9	G	116	124	Right-handed alpha
Helix 172	AT1	G	136	146	Right-handed alpha
Helix 173	AT2	G	157	161	Right-handed 310
Helix 174	AT3	G	187	192	Right-handed alpha
Helix 175	AT4	G	192	197	Right-handed alpha
Helix 176	AT5	G	197	211	Right-handed alpha
Helix 177	AT6	G	223	237	Right-handed alpha
Helix 178	AT7	G	254	264	Right-handed alpha
Helix 179	AT8	G	272	274	Right-handed 310
Helix 180	AT9	G	281	296	Right-handed alpha
Helix 181	AU1	G	316	322	Right-handed 310
Helix 182	AU2	G	327	333	Right-handed 310
Helix 183	AU3	G	355	366	Right-handed alpha
Helix 184	AU4	G	366	373	Right-handed alpha
Helix 185	AU5	G	374	391	Right-handed alpha
Helix 186	AU6	G	411	416	Right-handed alpha
Helix 187	AU7	G	417	426	Right-handed alpha
Helix 188	AU8	G	433	445	Right-handed alpha
Helix 189	AU9	G	447	462	Right-handed alpha
Helix 190	AV1	G	463	465	Right-handed 310
Helix 191	AV2	G	467	494	Right-handed alpha
Helix 192	AV3	G	513	519	Right-handed alpha
Helix 193	AV4	G	525	531	Right-handed alpha
Helix 194	AV5	G	532	539	Right-handed alpha
Helix 195	AV6	G	540	544	Right-handed 310
Helix 196	AV7	G	551	552	Right-handed 310
Helix 197	AV8	G	554	554	Right-handed 310
Helix 198	AV9	G	555	569	Right-handed alpha
Helix 199	AW1	G	580	596	Right-handed alpha
Helix 200	AW2	G	600	604	Right-handed 310
Helix 201	AW3	G	605	628	Right-handed alpha
Helix 202	AW4	G	650	658	Right-handed alpha
Helix 203	AW5	G	660	671	Right-handed alpha
Helix 204	AW6	G	683	701	Right-handed alpha
Helix 205	AW7	G	707	723	Right-handed alpha
Helix 206	AW8	G	731	743	Right-handed alpha
Helix 207	AW9	G	750	765	Right-handed alpha
Helix 208	AX1	G	770	786	Right-handed alpha

There are 14 sheets in PDB entry 8WFN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	150	152	first strand
Strand 2	A	166	169	parallel
Strand 3	A	128	131	parallel
Strand 4	A	42	46	parallel
Strand 5	A	212	216	parallel
Strand 6	A	244	246	parallel
Strand 7	A	267	269	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	338	340	first strand
Strand 2	A	346	348	anti-parallel

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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	574	575	first strand
Strand 2	C	27	33	anti-parallel
Strand 3	C	58	63	anti-parallel
Strand 4	C	218	222	anti-parallel
Strand 5	C	191	199	anti-parallel
Strand 6	C	171	177	anti-parallel
Strand 7	C	10	15	anti-parallel
Strand 8	C	21	25	anti-parallel
Strand 9	C	67	68	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	574	575	first strand
Strand 2	C	27	33	anti-parallel
Strand 3	C	58	63	anti-parallel
Strand 4	C	218	222	anti-parallel
Strand 5	C	191	199	anti-parallel
Strand 6	C	233	235	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	150	152	first strand
Strand 2	B	166	169	parallel
Strand 3	B	128	131	parallel
Strand 4	B	42	46	parallel
Strand 5	B	212	216	parallel
Strand 6	B	244	247	parallel
Strand 7	B	267	270	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	338	340	first strand
Strand 2	B	346	348	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	67	68	first strand
Strand 2	D	20	31	anti-parallel
Strand 3	D	10	15	anti-parallel
Strand 4	D	171	176	anti-parallel
Strand 5	D	192	200	anti-parallel
Strand 6	D	233	235	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	67	68	first strand
Strand 2	D	20	31	anti-parallel
Strand 3	D	60	63	anti-parallel
Strand 4	D	218	222	anti-parallel
Strand 5	D	192	200	anti-parallel
Strand 6	D	233	235	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	42	46	first strand
Strand 2	E	212	216	parallel
Strand 3	E	244	246	parallel
Strand 4	E	267	269	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	574	575	first strand
Strand 2	F	29	30	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	67	68	first strand
Strand 2	F	23	24	anti-parallel
Strand 3	F	12	14	anti-parallel
Strand 4	F	171	175	anti-parallel
Strand 5	F	192	198	anti-parallel
Strand 6	F	233	235	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	150	152	first strand
Strand 2	G	166	169	parallel
Strand 3	G	128	131	parallel
Strand 4	G	42	46	parallel
Strand 5	G	212	215	parallel
Strand 6	G	244	247	parallel
Strand 7	G	269	270	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	338	340	first strand
Strand 2	G	346	348	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	23	26	first strand
Strand 2	H	10	13	anti-parallel
Strand 3	H	173	176	anti-parallel
Strand 4	H	193	195	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8WFN

Analysis of interatomic Contacts of Structural Units in PDB entry:
8WFN