Analysis of interatomic Contacts of Structural Units in PDB entry:
8WFU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WFU entry

There are 4 chains in PDB entry 8WFU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 444
B
 LYS 2ILE 444
C
 LYS 2ILE 444
D
 LYS 2ILE 444
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 8WFU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 20Right-handed alpha
Helix 2
AA2
A
31 38Right-handed alpha
Helix 3
AA3
A
43 47Right-handed 310
Helix 4
AA4
A
54 69Right-handed alpha
Helix 5
AA5
A
79 84Right-handed alpha
Helix 6
AA6
A
91 108Right-handed alpha
Helix 7
AA7
A
122 128Right-handed alpha
Helix 8
AA8
A
129 134Right-handed 310
Helix 9
AA9
A
135 152Right-handed alpha
Helix 10
AB1
A
163 173Right-handed alpha
Helix 11
AB2
A
183 209Right-handed alpha
Helix 12
AB3
A
230 245Right-handed alpha
Helix 13
AB4
A
245 254Right-handed alpha
Helix 14
AB5
A
258 267Right-handed alpha
Helix 15
AB6
A
275 283Right-handed alpha
Helix 16
AB7
A
327 341Right-handed alpha
Helix 17
AB8
A
368 388Right-handed alpha
Helix 18
AB9
A
405 412Right-handed 310
Helix 19
AC1
A
429 442Right-handed alpha
Helix 20
AC2
B
15 20Right-handed alpha
Helix 21
AC3
B
31 38Right-handed alpha
Helix 22
AC4
B
43 47Right-handed 310
Helix 23
AC5
B
54 70Right-handed alpha
Helix 24
AC6
B
79 84Right-handed alpha
Helix 25
AC7
B
91 107Right-handed alpha
Helix 26
AC8
B
122 128Right-handed alpha
Helix 27
AC9
B
129 134Right-handed 310
Helix 28
AD1
B
135 152Right-handed alpha
Helix 29
AD2
B
163 173Right-handed alpha
Helix 30
AD3
B
183 209Right-handed alpha
Helix 31
AD4
B
230 245Right-handed alpha
Helix 32
AD5
B
245 255Right-handed alpha
Helix 33
AD6
B
258 267Right-handed alpha
Helix 34
AD7
B
275 283Right-handed alpha
Helix 35
AD8
B
327 341Right-handed alpha
Helix 36
AD9
B
368 388Right-handed alpha
Helix 37
AE1
B
405 412Right-handed 310
Helix 38
AE2
B
429 442Right-handed alpha
Helix 39
AE3
C
15 20Right-handed alpha
Helix 40
AE4
C
31 39Right-handed alpha
Helix 41
AE5
C
43 47Right-handed 310
Helix 42
AE6
C
54 70Right-handed alpha
Helix 43
AE7
C
79 84Right-handed alpha
Helix 44
AE8
C
91 108Right-handed alpha
Helix 45
AE9
C
122 128Right-handed alpha
Helix 46
AF1
C
129 134Right-handed 310
Helix 47
AF2
C
135 152Right-handed alpha
Helix 48
AF3
C
163 173Right-handed alpha
Helix 49
AF4
C
183 209Right-handed alpha
Helix 50
AF5
C
230 245Right-handed alpha
Helix 51
AF6
C
245 255Right-handed alpha
Helix 52
AF7
C
258 267Right-handed alpha
Helix 53
AF8
C
275 283Right-handed alpha
Helix 54
AF9
C
327 341Right-handed alpha
Helix 55
AG1
C
368 388Right-handed alpha
Helix 56
AG2
C
405 412Right-handed 310
Helix 57
AG3
C
429 442Right-handed alpha
Helix 58
AG4
D
15 20Right-handed alpha
Helix 59
AG5
D
31 39Right-handed alpha
Helix 60
AG6
D
43 47Right-handed 310
Helix 61
AG7
D
54 70Right-handed alpha
Helix 62
AG8
D
79 84Right-handed alpha
Helix 63
AG9
D
91 108Right-handed alpha
Helix 64
AH1
D
122 128Right-handed alpha
Helix 65
AH2
D
129 134Right-handed 310
Helix 66
AH3
D
135 152Right-handed alpha
Helix 67
AH4
D
163 173Right-handed alpha
Helix 68
AH5
D
183 209Right-handed alpha
Helix 69
AH6
D
230 245Right-handed alpha
Helix 70
AH7
D
245 255Right-handed alpha
Helix 71
AH8
D
258 267Right-handed alpha
Helix 72
AH9
D
275 283Right-handed alpha
Helix 73
AI1
D
327 341Right-handed alpha
Helix 74
AI2
D
368 388Right-handed alpha
Helix 75
AI3
D
405 412Right-handed 310
Helix 76
AI4
D
429 442Right-handed alpha
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There are 12 sheets in PDB entry 8WFU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 13first strand
Strand 2
A
73 77parallel
Strand 3
A
111 117parallel
Strand 4
A
157 162parallel
Strand 5
A
214 220parallel
Strand 6
A
288 292parallel
Strand 7
A
347 352parallel
Strand 8
A
392 398parallel
Strand 9
A
9 13parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 226first strand
Strand 2
A
297 300parallel
Strand 3
A
310 312anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
417 419first strand
Strand 2
A
426 428anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 13first strand
Strand 2
B
73 77parallel
Strand 3
B
111 117parallel
Strand 4
B
157 162parallel
Strand 5
B
214 220parallel
Strand 6
B
288 292parallel
Strand 7
B
347 352parallel
Strand 8
B
392 398parallel
Strand 9
B
9 13parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
224 226first strand
Strand 2
B
297 300parallel
Strand 3
B
310 312anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
417 419first strand
Strand 2
B
426 428anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 13first strand
Strand 2
C
73 77parallel
Strand 3
C
111 117parallel
Strand 4
C
157 162parallel
Strand 5
C
214 220parallel
Strand 6
C
288 292parallel
Strand 7
C
347 352parallel
Strand 8
C
392 398parallel
Strand 9
C
9 13parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
224 226first strand
Strand 2
C
297 300parallel
Strand 3
C
310 311anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
417 420first strand
Strand 2
C
425 428anti-parallel
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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
9 13first strand
Strand 2
D
73 77parallel
Strand 3
D
111 117parallel
Strand 4
D
157 162parallel
Strand 5
D
214 220parallel
Strand 6
D
288 292parallel
Strand 7
D
347 351parallel
Strand 8
D
392 398parallel
Strand 9
D
9 13parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
224 226first strand
Strand 2
D
297 301parallel
Strand 3
D
309 312anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
417 420first strand
Strand 2
D
425 428anti-parallel
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