Analysis of interatomic Contacts of Structural Units in PDB entry:
8WG1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8WG1 entry

There are 2 chains in PDB entry 8WG1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 20	ALA 701
B	SER 20	TYR 581

There are 63 helices in PDB entry 8WG1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	181	190	Right-handed alpha
Helix 2	AA2	A	274	281	Right-handed alpha
Helix 3	AA3	A	282	288	Right-handed alpha
Helix 4	AA4	A	308	313	Right-handed alpha
Helix 5	AA5	A	333	337	Right-handed 310
Helix 6	AA6	A	346	360	Right-handed alpha
Helix 7	AA7	A	373	377	Right-handed 310
Helix 8	AA8	A	396	407	Right-handed alpha
Helix 9	AA9	A	420	439	Right-handed alpha
Helix 10	AB1	A	460	477	Right-handed alpha
Helix 11	AB2	A	491	495	Right-handed 310
Helix 12	AB3	A	507	513	Right-handed 310
Helix 13	AB4	A	521	529	Right-handed 310
Helix 14	AB5	A	556	567	Right-handed alpha
Helix 15	AB6	A	577	582	Right-handed alpha
Helix 16	AB7	A	584	594	Right-handed alpha
Helix 17	AB8	B	181	190	Right-handed alpha
Helix 18	AB9	B	274	281	Right-handed alpha
Helix 19	AC1	B	282	288	Right-handed alpha
Helix 20	AC2	B	308	313	Right-handed alpha
Helix 21	AC3	B	333	337	Right-handed 310
Helix 22	AC4	B	346	360	Right-handed alpha
Helix 23	AC5	B	373	377	Right-handed 310
Helix 24	AC6	B	396	407	Right-handed alpha
Helix 25	AC7	B	420	439	Right-handed alpha
Helix 26	AC8	B	460	477	Right-handed alpha
Helix 27	AC9	B	491	495	Right-handed 310
Helix 28	AD1	B	507	513	Right-handed 310
Helix 29	AD2	B	521	529	Right-handed 310
Helix 30	AD3	B	556	567	Right-handed alpha
Helix 31	AD4	B	577	584	Right-handed alpha
Helix 32	AD5	B	584	594	Right-handed alpha
Helix 33	AD6	C	181	190	Right-handed alpha
Helix 34	AD7	C	274	281	Right-handed alpha
Helix 35	AD8	C	282	288	Right-handed alpha
Helix 36	AD9	C	308	313	Right-handed alpha
Helix 37	AE1	C	333	337	Right-handed 310
Helix 38	AE2	C	346	360	Right-handed alpha
Helix 39	AE3	C	373	377	Right-handed 310
Helix 40	AE4	C	396	407	Right-handed alpha
Helix 41	AE5	C	420	439	Right-handed alpha
Helix 42	AE6	C	460	477	Right-handed alpha
Helix 43	AE7	C	491	495	Right-handed 310
Helix 44	AE8	C	507	513	Right-handed 310
Helix 45	AE9	C	521	529	Right-handed 310
Helix 46	AF1	C	556	567	Right-handed alpha
Helix 47	AF2	C	577	584	Right-handed alpha
Helix 48	AF3	C	584	594	Right-handed alpha
Helix 49	AF4	D	181	190	Right-handed alpha
Helix 50	AF5	D	274	281	Right-handed alpha
Helix 51	AF6	D	282	288	Right-handed alpha
Helix 52	AF7	D	308	313	Right-handed alpha
Helix 53	AF8	D	333	337	Right-handed 310
Helix 54	AF9	D	346	360	Right-handed alpha
Helix 55	AG1	D	373	377	Right-handed 310
Helix 56	AG2	D	396	407	Right-handed alpha
Helix 57	AG3	D	420	439	Right-handed alpha
Helix 58	AG4	D	460	477	Right-handed alpha
Helix 59	AG5	D	507	513	Right-handed 310
Helix 60	AG6	D	521	529	Right-handed 310
Helix 61	AG7	D	556	567	Right-handed alpha
Helix 62	AG8	D	577	584	Right-handed alpha
Helix 63	AG9	D	584	594	Right-handed alpha

There are 32 sheets in PDB entry 8WG1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	21	23	first strand
Strand 2	A	29	35	anti-parallel
Strand 3	A	41	47	anti-parallel
Strand 4	A	50	57	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	62	first strand
Strand 2	A	142	148	anti-parallel
Strand 3	A	257	259	anti-parallel

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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	87	first strand
Strand 2	A	97	110	anti-parallel
Strand 3	A	116	124	anti-parallel
Strand 4	A	127	134	anti-parallel
Strand 5	A	266	272	anti-parallel
Strand 6	A	218	224	anti-parallel
Strand 7	A	209	212	anti-parallel
Strand 8	A	159	162	anti-parallel
Strand 9	A	175	178	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	87	first strand
Strand 2	A	97	110	anti-parallel
Strand 3	A	116	124	anti-parallel
Strand 4	A	127	134	anti-parallel
Strand 5	A	262	263	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	153	first strand
Strand 2	A	242	247	anti-parallel
Strand 3	A	232	237	anti-parallel
Strand 4	A	204	205	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	499	502	first strand
Strand 2	A	480	483	parallel
Strand 3	A	442	446	parallel
Strand 4	A	410	416	parallel
Strand 5	A	364	367	parallel
Strand 6	A	302	307	parallel
Strand 7	A	571	573	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	598	607	first strand
Strand 2	A	611	618	anti-parallel
Strand 3	A	624	630	anti-parallel
Strand 4	A	692	699	anti-parallel
Strand 5	A	650	657	anti-parallel
Strand 6	A	670	677	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	635	640	first strand
Strand 2	A	682	687	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	23	first strand
Strand 2	B	29	35	anti-parallel
Strand 3	B	41	47	anti-parallel
Strand 4	B	50	57	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	62	first strand
Strand 2	B	142	148	anti-parallel
Strand 3	B	257	259	anti-parallel

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There are 9 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	87	first strand
Strand 2	B	97	110	anti-parallel
Strand 3	B	116	124	anti-parallel
Strand 4	B	127	134	anti-parallel
Strand 5	B	266	272	anti-parallel
Strand 6	B	218	224	anti-parallel
Strand 7	B	209	212	anti-parallel
Strand 8	B	159	162	anti-parallel
Strand 9	B	175	178	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	87	first strand
Strand 2	B	97	110	anti-parallel
Strand 3	B	116	124	anti-parallel
Strand 4	B	127	134	anti-parallel
Strand 5	B	262	263	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	151	153	first strand
Strand 2	B	242	247	anti-parallel
Strand 3	B	232	237	anti-parallel
Strand 4	B	204	205	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	499	502	first strand
Strand 2	B	480	483	parallel
Strand 3	B	442	446	parallel
Strand 4	B	410	416	parallel
Strand 5	B	364	367	parallel
Strand 6	B	302	307	parallel
Strand 7	B	571	573	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	598	607	first strand
Strand 2	B	611	618	anti-parallel
Strand 3	B	624	630	anti-parallel
Strand 4	B	692	699	anti-parallel
Strand 5	B	650	657	anti-parallel
Strand 6	B	670	677	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	635	640	first strand
Strand 2	B	682	687	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	21	23	first strand
Strand 2	C	29	35	anti-parallel
Strand 3	C	41	47	anti-parallel
Strand 4	C	50	57	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	60	62	first strand
Strand 2	C	142	148	anti-parallel
Strand 3	C	257	259	anti-parallel

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There are 9 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	87	first strand
Strand 2	C	97	110	anti-parallel
Strand 3	C	116	124	anti-parallel
Strand 4	C	127	134	anti-parallel
Strand 5	C	266	272	anti-parallel
Strand 6	C	218	224	anti-parallel
Strand 7	C	209	212	anti-parallel
Strand 8	C	159	162	anti-parallel
Strand 9	C	175	178	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	87	first strand
Strand 2	C	97	110	anti-parallel
Strand 3	C	116	124	anti-parallel
Strand 4	C	127	134	anti-parallel
Strand 5	C	262	263	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	151	153	first strand
Strand 2	C	242	247	anti-parallel
Strand 3	C	232	237	anti-parallel
Strand 4	C	204	205	anti-parallel

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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	499	502	first strand
Strand 2	C	480	483	parallel
Strand 3	C	442	446	parallel
Strand 4	C	410	416	parallel
Strand 5	C	364	367	parallel
Strand 6	C	302	307	parallel
Strand 7	C	571	573	parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	598	607	first strand
Strand 2	C	611	618	anti-parallel
Strand 3	C	624	630	anti-parallel
Strand 4	C	692	699	anti-parallel
Strand 5	C	650	657	anti-parallel
Strand 6	C	670	677	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	635	640	first strand
Strand 2	C	682	687	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	21	23	first strand
Strand 2	D	29	35	anti-parallel
Strand 3	D	41	47	anti-parallel
Strand 4	D	50	57	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	60	62	first strand
Strand 2	D	142	148	anti-parallel
Strand 3	D	257	259	anti-parallel

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There are 9 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	73	87	first strand
Strand 2	D	97	110	anti-parallel
Strand 3	D	116	124	anti-parallel
Strand 4	D	127	134	anti-parallel
Strand 5	D	266	272	anti-parallel
Strand 6	D	218	224	anti-parallel
Strand 7	D	209	212	anti-parallel
Strand 8	D	159	162	anti-parallel
Strand 9	D	175	178	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	73	87	first strand
Strand 2	D	97	110	anti-parallel
Strand 3	D	116	124	anti-parallel
Strand 4	D	127	134	anti-parallel
Strand 5	D	262	263	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	151	153	first strand
Strand 2	D	242	247	anti-parallel
Strand 3	D	232	237	anti-parallel
Strand 4	D	204	205	anti-parallel

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There are 7 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	499	502	first strand
Strand 2	D	480	483	parallel
Strand 3	D	442	446	parallel
Strand 4	D	410	416	parallel
Strand 5	D	364	367	parallel
Strand 6	D	302	307	parallel
Strand 7	D	571	573	parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	598	607	first strand
Strand 2	D	611	618	anti-parallel
Strand 3	D	624	630	anti-parallel
Strand 4	D	692	699	anti-parallel
Strand 5	D	650	657	anti-parallel
Strand 6	D	670	677	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	635	639	first strand
Strand 2	D	683	687	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8WG1

Analysis of interatomic Contacts of Structural Units in PDB entry:
8WG1