Analysis of interatomic Contacts of Structural Units in PDB entry:
8WG6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WG6 entry

There is 1 chain in PDB entry 8WG6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 29THR 447
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 8 helices in PDB entry 8WG6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
70 74Right-handed 310
Helix 2
AA2
A
79 88Right-handed alpha
Helix 3
AA3
A
94 105Right-handed alpha
Helix 4
AA4
A
109 111Right-handed 310
Helix 5
AA5
A
207 211Right-handed 310
Helix 6
AA6
A
246 249Right-handed 310
Helix 7
AA7
A
263 267Right-handed 310
Helix 8
AA8
A
307 311Right-handed 310
Back to top of page

There are 9 sheets in PDB entry 8WG6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 128first strand
Strand 2
A
31 38anti-parallel
Strand 3
A
161 164parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 65first strand
Strand 2
A
43 54anti-parallel
Strand 3
A
113 117anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 65first strand
Strand 2
A
43 54anti-parallel
Strand 3
A
131 137anti-parallel
Strand 4
A
154 157anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 185first strand
Strand 2
A
171 177anti-parallel
Strand 3
A
196 203anti-parallel
Strand 4
A
275 284anti-parallel
Strand 5
A
226 228anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 185first strand
Strand 2
A
171 177anti-parallel
Strand 3
A
196 203anti-parallel
Strand 4
A
275 284anti-parallel
Strand 5
A
233 238anti-parallel
Strand 6
A
241 244anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 189first strand
Strand 2
A
320 325parallel
Strand 3
A
295 304anti-parallel
Strand 4
A
216 220anti-parallel
Strand 5
A
257 261anti-parallel
Strand 6
A
250 252anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 189first strand
Strand 2
A
320 325parallel
Strand 3
A
295 304anti-parallel
Strand 4
A
314 316anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 375first strand
Strand 2
A
327 335anti-parallel
Strand 3
A
431 438parallel
Strand 4
A
424 426anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 362first strand
Strand 2
A
345 351anti-parallel
Strand 3
A
378 386anti-parallel
Strand 4
A
397 405anti-parallel
Strand 5
A
411 418anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il