Analysis of interatomic Contacts of Structural Units in PDB entry:
8WG9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WG9 entry

There are 2 chains in PDB entry 8WG9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASN 41LYS 855
C
 LYS 23GLN 820
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 8WG9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
75 91Right-handed alpha
Helix 2
AA2
B
112 127Right-handed alpha
Helix 3
AA3
B
158 170Right-handed alpha
Helix 4
AA4
B
171 173Right-handed 310
Helix 5
AA5
B
183 188Right-handed 310
Helix 6
AA6
B
201 216Right-handed alpha
Helix 7
AA7
B
228 246Right-handed alpha
Helix 8
AA8
B
263 273Right-handed alpha
Helix 9
AA9
B
286 300Right-handed alpha
Helix 10
AB1
B
341 351Right-handed alpha
Helix 11
AB2
B
361 370Right-handed alpha
Helix 12
AB3
B
393 397Right-handed 310
Helix 13
AB4
B
405 428Right-handed alpha
Helix 14
AB5
B
435 439Right-handed 310
Helix 15
AB6
B
442 453Right-handed alpha
Helix 16
AB7
B
458 460Right-handed 310
Helix 17
AB8
B
588 612Right-handed alpha
Helix 18
AB9
B
615 620Right-handed alpha
Helix 19
AC1
B
622 643Right-handed alpha
Helix 20
AC2
B
648 684Right-handed alpha
Helix 21
AC3
B
695 721Right-handed alpha
Helix 22
AC4
B
736 740Right-handed 310
Helix 23
AC5
B
749 774Right-handed alpha
Helix 24
AC6
B
775 777Right-handed 310
Helix 25
AC7
B
783 800Right-handed alpha
Helix 26
AC8
B
800 808Right-handed alpha
Helix 27
AC9
B
809 811Right-handed 310
Helix 28
AD1
B
813 838Right-handed alpha
Helix 29
AD2
B
838 848Right-handed alpha
Helix 30
AD3
B
849 852Right-handed 310
Helix 31
AD4
C
58 74Right-handed alpha
Helix 32
AD5
C
94 103Right-handed alpha
Helix 33
AD6
C
103 108Right-handed alpha
Helix 34
AD7
C
144 156Right-handed alpha
Helix 35
AD8
C
157 159Right-handed 310
Helix 36
AD9
C
187 189Right-handed 310
Helix 37
AE1
C
190 202Right-handed alpha
Helix 38
AE2
C
214 231Right-handed alpha
Helix 39
AE3
C
246 259Right-handed alpha
Helix 40
AE4
C
271 285Right-handed alpha
Helix 41
AE5
C
295 298Right-handed 310
Helix 42
AE6
C
309 312Right-handed 310
Helix 43
AE7
C
324 333Right-handed alpha
Helix 44
AE8
C
344 353Right-handed alpha
Helix 45
AE9
C
361 365Right-handed 310
Helix 46
AF1
C
366 370Right-handed 310
Helix 47
AF2
C
377 400Right-handed alpha
Helix 48
AF3
C
407 411Right-handed 310
Helix 49
AF4
C
415 420Right-handed alpha
Helix 50
AF5
C
482 485Right-handed 310
Helix 51
AF6
C
489 493Right-handed 310
Helix 52
AF7
C
516 520Right-handed 310
Helix 53
AF8
C
568 592Right-handed alpha
Helix 54
AF9
C
595 600Right-handed alpha
Helix 55
AG1
C
602 623Right-handed alpha
Helix 56
AG2
C
628 647Right-handed alpha
Helix 57
AG3
C
649 658Right-handed alpha
Helix 58
AG4
C
675 699Right-handed alpha
Helix 59
AG5
C
726 728Right-handed 310
Helix 60
AG6
C
729 741Right-handed alpha
Helix 61
AG7
C
745 752Right-handed 310
Helix 62
AG8
C
755 777Right-handed alpha
Helix 63
AG9
C
778 783Right-handed alpha
Helix 64
AH1
C
786 820Right-handed alpha
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There are 13 sheets in PDB entry 8WG9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 45first strand
Strand 2
B
101 107anti-parallel
Strand 3
B
49 55parallel
Strand 4
B
150 154parallel
Strand 5
B
176 178parallel
Strand 6
B
195 197parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
249 256first strand
Strand 2
B
220 226parallel
Strand 3
B
280 283parallel
Strand 4
B
307 310parallel
Strand 5
B
332 336parallel
Strand 6
B
475 481anti-parallel
Strand 7
B
488 495anti-parallel
Strand 8
B
499 501anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
455 456first strand
Strand 2
B
462 463anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
528 532first strand
Strand 2
B
540 544anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
549 553first strand
Strand 2
B
556 559anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
564 566first strand
Strand 2
B
573 575anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
578 580first strand
Strand 2
B
741 746parallel
Strand 3
B
725 732anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
84 90first strand
Strand 2
C
32 38parallel
Strand 3
C
140 141parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
41 43first strand
Strand 2
C
50 53anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
162 164first strand
Strand 2
C
181 183parallel
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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
235 241first strand
Strand 2
C
207 212parallel
Strand 3
C
265 268parallel
Strand 4
C
290 293parallel
Strand 5
C
314 319parallel
Strand 6
C
453 459anti-parallel
Strand 7
C
467 474anti-parallel
Strand 8
C
478 480anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
508 510first strand
Strand 2
C
522 524anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
529 532first strand
Strand 2
C
536 539anti-parallel
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