Analysis of interatomic Contacts of Structural Units in PDB entry:
8WGE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8WGE entry

There are 5 chains in PDB entry 8WGE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 25	TYR 406
B	THR 25	TYR 406
C	THR 25	TYR 406
D	THR 25	TYR 406
E	THR 25	TYR 406

There are 39 helices in PDB entry 8WGE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	26	38	Right-handed alpha
Helix 2	AA2	A	103	105	Right-handed 310
Helix 3	AA3	A	217	238	Right-handed alpha
Helix 4	AA4	A	239	241	Right-handed 310
Helix 5	AA5	A	248	268	Right-handed alpha
Helix 6	AA6	A	279	308	Right-handed alpha
Helix 7	AA7	A	351	406	Right-handed alpha
Helix 8	AA8	B	26	38	Right-handed alpha
Helix 9	AA9	B	103	105	Right-handed 310
Helix 10	AB1	B	217	224	Right-handed alpha
Helix 11	AB2	B	224	238	Right-handed alpha
Helix 12	AB3	B	239	241	Right-handed 310
Helix 13	AB4	B	248	268	Right-handed alpha
Helix 14	AB5	B	279	308	Right-handed alpha
Helix 15	AB6	B	351	405	Right-handed alpha
Helix 16	AB7	C	26	38	Right-handed alpha
Helix 17	AB8	C	103	105	Right-handed 310
Helix 18	AB9	C	217	224	Right-handed alpha
Helix 19	AC1	C	224	238	Right-handed alpha
Helix 20	AC2	C	239	241	Right-handed 310
Helix 21	AC3	C	248	268	Right-handed alpha
Helix 22	AC4	C	279	308	Right-handed alpha
Helix 23	AC5	C	351	405	Right-handed alpha
Helix 24	AC6	D	26	38	Right-handed alpha
Helix 25	AC7	D	103	105	Right-handed 310
Helix 26	AC8	D	217	224	Right-handed alpha
Helix 27	AC9	D	224	238	Right-handed alpha
Helix 28	AD1	D	239	241	Right-handed 310
Helix 29	AD2	D	248	268	Right-handed alpha
Helix 30	AD3	D	279	308	Right-handed alpha
Helix 31	AD4	D	351	405	Right-handed alpha
Helix 32	AD5	E	26	38	Right-handed alpha
Helix 33	AD6	E	103	105	Right-handed 310
Helix 34	AD7	E	217	224	Right-handed alpha
Helix 35	AD8	E	224	238	Right-handed alpha
Helix 36	AD9	E	239	241	Right-handed 310
Helix 37	AE1	E	248	268	Right-handed alpha
Helix 38	AE2	E	279	308	Right-handed alpha
Helix 39	AE3	E	351	405	Right-handed alpha

There are 22 sheets in PDB entry 8WGE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	54	first strand
Strand 2	A	177	179	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	101	first strand
Strand 2	A	126	130	anti-parallel
Strand 3	A	134	146	anti-parallel
Strand 4	A	116	122	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	101	first strand
Strand 2	A	126	130	anti-parallel
Strand 3	A	134	146	anti-parallel
Strand 4	A	70	82	anti-parallel
Strand 5	A	57	64	anti-parallel
Strand 6	A	182	184	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	158	164	first strand
Strand 2	A	207	215	anti-parallel
Strand 3	A	192	201	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	54	first strand
Strand 2	B	177	179	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	101	first strand
Strand 2	B	126	130	anti-parallel
Strand 3	B	134	146	anti-parallel
Strand 4	B	116	122	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	101	first strand
Strand 2	B	126	130	anti-parallel
Strand 3	B	134	146	anti-parallel
Strand 4	B	70	82	anti-parallel
Strand 5	B	57	64	anti-parallel
Strand 6	B	182	184	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	158	164	first strand
Strand 2	B	207	215	anti-parallel
Strand 3	B	192	201	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	52	54	first strand
Strand 2	C	177	179	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	97	101	first strand
Strand 2	C	126	130	anti-parallel
Strand 3	C	134	146	anti-parallel
Strand 4	C	116	122	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	97	101	first strand
Strand 2	C	126	130	anti-parallel
Strand 3	C	134	146	anti-parallel
Strand 4	C	70	82	anti-parallel
Strand 5	C	57	64	anti-parallel
Strand 6	C	182	184	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	158	164	first strand
Strand 2	C	207	215	anti-parallel
Strand 3	C	192	201	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	52	54	first strand
Strand 2	D	177	179	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	97	101	first strand
Strand 2	D	126	130	anti-parallel
Strand 3	D	134	146	anti-parallel
Strand 4	D	116	122	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	97	101	first strand
Strand 2	D	126	130	anti-parallel
Strand 3	D	134	146	anti-parallel
Strand 4	D	70	82	anti-parallel
Strand 5	D	57	64	anti-parallel
Strand 6	D	182	184	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	110	111	first strand
Strand 2	D	166	167	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	158	164	first strand
Strand 2	D	207	215	anti-parallel
Strand 3	D	192	201	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	52	54	first strand
Strand 2	E	177	179	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	97	101	first strand
Strand 2	E	126	130	anti-parallel
Strand 3	E	134	146	anti-parallel
Strand 4	E	116	122	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	97	101	first strand
Strand 2	E	126	130	anti-parallel
Strand 3	E	134	146	anti-parallel
Strand 4	E	70	82	anti-parallel
Strand 5	E	57	64	anti-parallel
Strand 6	E	182	184	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	110	111	first strand
Strand 2	E	166	167	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	158	164	first strand
Strand 2	E	207	215	anti-parallel
Strand 3	E	192	201	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8WGE

Analysis of interatomic Contacts of Structural Units in PDB entry:
8WGE