Analysis of interatomic Contacts of Structural Units in PDB entry:
8WGH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8WGH entry

There are 5 chains in PDB entry 8WGH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
1	ALA 47	PRO 245
2	PHE 54	PHE 262
3	ARG 52	PHE 271
4	LYS 49	ILE 245
A	GLU 9	PHE 450

There are157 helices in PDB entry 8WGH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	1	77	108	Right-handed alpha
Helix 2	AA2	1	114	118	Right-handed 310
Helix 3	AA3	1	138	155	Right-handed alpha
Helix 4	AA4	1	162	168	Right-handed alpha
Helix 5	AA5	1	170	174	Right-handed 310
Helix 6	AA6	1	181	213	Right-handed alpha
Helix 7	AA7	1	217	228	Right-handed alpha
Helix 8	AA8	1	234	239	Right-handed alpha
Helix 9	AA9	2	91	126	Right-handed alpha
Helix 10	AB1	2	135	139	Right-handed 310
Helix 11	AB2	2	144	169	Right-handed alpha
Helix 12	AB3	2	193	198	Right-handed alpha
Helix 13	AB4	2	208	239	Right-handed alpha
Helix 14	AB5	2	241	252	Right-handed alpha
Helix 15	AB6	3	58	65	Right-handed alpha
Helix 16	AB7	3	91	122	Right-handed alpha
Helix 17	AB8	3	126	130	Right-handed 310
Helix 18	AB9	3	132	136	Right-handed 310
Helix 19	AC1	3	139	143	Right-handed 310
Helix 20	AC2	3	150	175	Right-handed alpha
Helix 21	AC3	3	177	181	Right-handed 310
Helix 22	AC4	3	186	191	Right-handed 310
Helix 23	AC5	3	201	206	Right-handed alpha
Helix 24	AC6	3	213	245	Right-handed alpha
Helix 25	AC7	3	248	257	Right-handed alpha
Helix 26	AC8	3	259	263	Right-handed 310
Helix 27	AC9	4	80	114	Right-handed alpha
Helix 28	AD1	4	124	128	Right-handed 310
Helix 29	AD2	4	133	158	Right-handed alpha
Helix 30	AD3	4	182	186	Right-handed 310
Helix 31	AD4	4	193	222	Right-handed alpha
Helix 32	AD5	4	224	235	Right-handed alpha
Helix 33	AD6	4	236	239	Right-handed 310
Helix 34	AD7	A	35	39	Right-handed 310
Helix 35	AD8	A	43	52	Right-handed alpha
Helix 36	AD9	A	55	60	Right-handed alpha
Helix 37	AE1	A	62	95	Right-handed alpha
Helix 38	AE2	A	97	104	Right-handed alpha
Helix 39	AE3	A	120	125	Right-handed 310
Helix 40	AE4	A	140	149	Right-handed alpha
Helix 41	AE5	A	152	180	Right-handed alpha
Helix 42	AE6	A	184	189	Right-handed alpha
Helix 43	AE7	A	190	201	Right-handed alpha
Helix 44	AE8	A	201	217	Right-handed alpha
Helix 45	AE9	A	217	228	Right-handed alpha
Helix 46	AF1	A	230	234	Right-handed 310
Helix 47	AF2	A	238	243	Right-handed alpha
Helix 48	AF3	A	246	251	Right-handed alpha
Helix 49	AF4	A	252	257	Right-handed 310
Helix 50	AF5	A	258	263	Right-handed alpha
Helix 51	AF6	A	266	270	Right-handed 310
Helix 52	AF7	A	287	306	Right-handed alpha
Helix 53	AF8	A	318	325	Right-handed alpha
Helix 54	AF9	A	337	343	Right-handed alpha
Helix 55	AG1	A	345	371	Right-handed alpha
Helix 56	AG2	A	380	413	Right-handed alpha
Helix 57	AG3	A	421	429	Right-handed alpha
Helix 58	AG4	A	430	462	Right-handed alpha
Helix 59	AG5	A	464	468	Right-handed 310
Helix 60	AG6	A	478	490	Right-handed alpha
Helix 61	AG7	A	490	495	Right-handed alpha
Helix 62	AG8	A	504	508	Right-handed 310
Helix 63	AG9	A	527	554	Right-handed alpha
Helix 64	AH1	A	563	568	Right-handed 310
Helix 65	AH2	A	585	616	Right-handed alpha
Helix 66	AH3	A	633	638	Right-handed alpha
Helix 67	AH4	A	640	648	Right-handed alpha
Helix 68	AH5	A	648	653	Right-handed alpha
Helix 69	AH6	A	654	659	Right-handed 310
Helix 70	AH7	A	664	687	Right-handed alpha
Helix 71	AH8	A	688	706	Right-handed alpha
Helix 72	AH9	A	718	749	Right-handed alpha
Helix 73	AI1	B	9	14	Right-handed alpha
Helix 74	AI2	B	18	27	Right-handed alpha
Helix 75	AI3	B	30	34	Right-handed 310
Helix 76	AI4	B	38	72	Right-handed alpha
Helix 77	AI5	B	73	78	Right-handed alpha
Helix 78	AI6	B	97	104	Right-handed alpha
Helix 79	AI7	B	119	127	Right-handed alpha
Helix 80	AI8	B	131	156	Right-handed alpha
Helix 81	AI9	B	164	169	Right-handed alpha
Helix 82	AJ1	B	170	181	Right-handed alpha
Helix 83	AJ2	B	183	197	Right-handed alpha
Helix 84	AJ3	B	197	203	Right-handed alpha
Helix 85	AJ4	B	222	228	Right-handed alpha
Helix 86	AJ5	B	229	234	Right-handed 310
Helix 87	AJ6	B	269	288	Right-handed alpha
Helix 88	AJ7	B	300	308	Right-handed alpha
Helix 89	AJ8	B	321	329	Right-handed alpha
Helix 90	AJ9	B	329	355	Right-handed alpha
Helix 91	AK1	B	364	397	Right-handed alpha
Helix 92	AK2	B	400	404	Right-handed 310
Helix 93	AK3	B	408	414	Right-handed alpha
Helix 94	AK4	B	414	446	Right-handed alpha
Helix 95	AK5	B	448	452	Right-handed 310
Helix 96	AK6	B	457	467	Right-handed alpha
Helix 97	AK7	B	476	480	Right-handed 310
Helix 98	AK8	B	483	489	Right-handed alpha
Helix 99	AK9	B	493	502	Right-handed alpha
Helix 100	AL1	B	513	540	Right-handed alpha
Helix 101	AL2	B	549	553	Right-handed 310
Helix 102	AL3	B	571	603	Right-handed alpha
Helix 103	AL4	B	606	613	Right-handed alpha
Helix 104	AL5	B	615	623	Right-handed alpha
Helix 105	AL6	B	623	628	Right-handed alpha
Helix 106	AL7	B	629	633	Right-handed 310
Helix 107	AL8	B	643	666	Right-handed alpha
Helix 108	AL9	B	667	684	Right-handed alpha
Helix 109	AM1	B	701	733	Right-handed alpha
Helix 110	AM2	C	17	21	Right-handed 310
Helix 111	AM3	C	44	48	Right-handed 310
Helix 112	AM4	C	52	57	Right-handed alpha
Helix 113	AM5	D	71	77	Right-handed alpha
Helix 114	AM6	D	113	128	Right-handed alpha
Helix 115	AM7	D	170	174	Right-handed 310
Helix 116	AM8	D	176	181	Right-handed 310
Helix 117	AM9	F	68	72	Right-handed 310
Helix 118	AN1	F	78	97	Right-handed alpha
Helix 119	AN2	F	103	126	Right-handed alpha
Helix 120	AN3	F	150	175	Right-handed alpha
Helix 121	AN4	F	182	187	Right-handed alpha
Helix 122	AN5	F	189	198	Right-handed alpha
Helix 123	AN6	F	199	201	Right-handed 310
Helix 124	AN7	F	202	214	Right-handed alpha
Helix 125	AN8	G	50	69	Right-handed alpha
Helix 126	AN9	G	70	79	Right-handed alpha
Helix 127	AO1	G	90	94	Right-handed alpha
Helix 128	AO2	G	95	99	Right-handed 310
Helix 129	AO3	G	101	106	Right-handed alpha
Helix 130	AO4	G	114	138	Right-handed alpha
Helix 131	AO5	H	63	68	Right-handed alpha
Helix 132	AO6	H	83	95	Right-handed alpha
Helix 133	AO7	H	96	98	Right-handed 310
Helix 134	AO8	H	99	122	Right-handed alpha
Helix 135	AO9	H	127	132	Right-handed alpha
Helix 136	AP1	I	6	16	Right-handed alpha
Helix 137	AP2	I	16	31	Right-handed alpha
Helix 138	AP3	J	2	9	Right-handed alpha
Helix 139	AP4	J	10	33	Right-handed alpha
Helix 140	AP5	K	53	72	Right-handed alpha
Helix 141	AP6	K	104	127	Right-handed alpha
Helix 142	AP7	L	64	66	Right-handed 310
Helix 143	AP8	L	74	79	Right-handed alpha
Helix 144	AP9	L	79	88	Right-handed alpha
Helix 145	AQ1	L	89	93	Right-handed 310
Helix 146	AQ2	L	97	121	Right-handed alpha
Helix 147	AQ3	L	128	156	Right-handed alpha
Helix 148	AQ4	L	177	180	Right-handed 310
Helix 149	AQ5	L	181	209	Right-handed alpha
Helix 150	AQ6	N	87	97	Right-handed alpha
Helix 151	AQ7	N	97	115	Right-handed alpha
Helix 152	AQ8	N	117	122	Right-handed alpha
Helix 153	AQ9	N	132	138	Right-handed alpha
Helix 154	AR1	N	146	153	Right-handed alpha
Helix 155	AR2	O	65	80	Right-handed alpha
Helix 156	AR3	O	88	102	Right-handed alpha
Helix 157	AR4	O	113	140	Right-handed alpha

There are 16 sheets in PDB entry 8WGH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	128	129	first strand
Strand 2	1	132	133	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	14	16	first strand
Strand 2	A	181	183	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	111	113	first strand
Strand 2	A	133	136	anti-parallel
Strand 3	A	126	127	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	513	515	first strand
Strand 2	A	518	521	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	618	620	first strand
Strand 2	A	626	628	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	90	first strand
Strand 2	B	113	115	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	635	636	first strand
Strand 2	B	639	640	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	65	68	first strand
Strand 2	C	4	8	anti-parallel
Strand 3	D	166	167	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	38	41	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	105	111	first strand
Strand 2	D	79	86	anti-parallel
Strand 3	D	132	137	anti-parallel
Strand 4	D	143	147	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	90	93	first strand
Strand 2	D	99	102	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	139	142	first strand
Strand 2	E	125	128	anti-parallel
Strand 3	E	109	115	anti-parallel
Strand 4	E	95	98	anti-parallel
Strand 5	E	147	149	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	73	74	first strand
Strand 2	F	129	130	anti-parallel
Strand 3	F	136	137	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	84	85	first strand
Strand 2	G	88	89	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	80	83	first strand
Strand 2	K	86	90	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	61	62	first strand
Strand 2	L	72	73	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8WGH

Analysis of interatomic Contacts of Structural Units in PDB entry:
8WGH