Analysis of interatomic Contacts of Structural Units in PDB entry:
8WGL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WGL entry

There are 2 chains in PDB entry 8WGL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 27LEU 182
B
 GLU 27LEU 182
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 8WGL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 41Right-handed alpha
Helix 2
AA2
A
57 73Right-handed alpha
Helix 3
AA3
A
83 85Right-handed 310
Helix 4
AA4
A
86 99Right-handed alpha
Helix 5
AA5
A
110 113Right-handed 310
Helix 6
AA6
A
114 128Right-handed alpha
Helix 7
AA7
A
136 143Right-handed alpha
Helix 8
AA8
A
161 167Right-handed alpha
Helix 9
AA9
A
172 177Right-handed alpha
Helix 10
AB1
B
29 41Right-handed alpha
Helix 11
AB2
B
57 73Right-handed alpha
Helix 12
AB3
B
83 99Right-handed alpha
Helix 13
AB4
B
110 113Right-handed 310
Helix 14
AB5
B
114 128Right-handed alpha
Helix 15
AB6
B
136 143Right-handed alpha
Helix 16
AB7
B
161 168Right-handed alpha
Helix 17
AB8
B
172 177Right-handed alpha
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There are 4 sheets in PDB entry 8WGL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 81first strand
Strand 2
A
46 52parallel
Strand 3
A
103 104parallel
Strand 4
A
132 133parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 151first strand
Strand 2
A
154 160anti-parallel
Strand 3
A
179 182parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 81first strand
Strand 2
B
46 52parallel
Strand 3
B
103 104parallel
Strand 4
B
132 133parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 151first strand
Strand 2
B
154 160anti-parallel
Strand 3
B
180 182parallel
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