Analysis of interatomic Contacts of Structural Units in PDB entry:
8WGO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WGO entry

There are 3 chains in PDB entry 8WGO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 869
C
 PHE -2UNK 42
B
 ASN 4ILE 869
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 8WGO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
68 82Right-handed alpha
Helix 2
AA2
A
92 100Right-handed alpha
Helix 3
AA3
A
121 133Right-handed alpha
Helix 4
AA4
A
200 206Right-handed alpha
Helix 5
AA5
A
260 275Right-handed alpha
Helix 6
AA6
A
306 314Right-handed alpha
Helix 7
AA7
A
326 347Right-handed alpha
Helix 8
AA8
A
401 417Right-handed alpha
Helix 9
AA9
A
420 425Right-handed 310
Helix 10
AB1
A
429 445Right-handed alpha
Helix 11
AB2
A
447 463Right-handed alpha
Helix 12
AB3
A
488 514Right-handed alpha
Helix 13
AB4
A
522 526Right-handed 310
Helix 14
AB5
A
536 548Right-handed alpha
Helix 15
AB6
A
557 572Right-handed alpha
Helix 16
AB7
A
584 596Right-handed alpha
Helix 17
AB8
A
597 615Right-handed alpha
Helix 18
AB9
A
625 639Right-handed alpha
Helix 19
AC1
A
642 663Right-handed alpha
Helix 20
AC2
A
690 705Right-handed alpha
Helix 21
AC3
A
707 722Right-handed alpha
Helix 22
AC4
A
748 759Right-handed alpha
Helix 23
AC5
A
767 769Right-handed 310
Helix 24
AC6
A
770 776Right-handed alpha
Helix 25
AC7
A
791 800Right-handed alpha
Helix 26
AC8
A
808 820Right-handed alpha
Helix 27
AC9
A
821 823Right-handed 310
Helix 28
AD1
A
847 861Right-handed alpha
Helix 29
AD2
C
2 9Right-handed alpha
Helix 30
AD3
B
69 82Right-handed alpha
Helix 31
AD4
B
92 100Right-handed alpha
Helix 32
AD5
B
121 133Right-handed alpha
Helix 33
AD6
B
200 206Right-handed alpha
Helix 34
AD7
B
260 275Right-handed alpha
Helix 35
AD8
B
306 314Right-handed alpha
Helix 36
AD9
B
325 345Right-handed alpha
Helix 37
AE1
B
346 348Right-handed 310
Helix 38
AE2
B
399 417Right-handed alpha
Helix 39
AE3
B
429 445Right-handed alpha
Helix 40
AE4
B
447 465Right-handed alpha
Helix 41
AE5
B
488 514Right-handed alpha
Helix 42
AE6
B
522 526Right-handed 310
Helix 43
AE7
B
537 548Right-handed alpha
Helix 44
AE8
B
557 572Right-handed alpha
Helix 45
AE9
B
585 596Right-handed alpha
Helix 46
AF1
B
598 614Right-handed alpha
Helix 47
AF2
B
624 639Right-handed alpha
Helix 48
AF3
B
642 663Right-handed alpha
Helix 49
AF4
B
691 705Right-handed alpha
Helix 50
AF5
B
707 722Right-handed alpha
Helix 51
AF6
B
748 759Right-handed alpha
Helix 52
AF7
B
767 769Right-handed 310
Helix 53
AF8
B
770 775Right-handed alpha
Helix 54
AF9
B
791 798Right-handed alpha
Helix 55
AG1
B
808 819Right-handed alpha
Helix 56
AG2
B
847 860Right-handed alpha
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There are 9 sheets in PDB entry 8WGO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 38first strand
Strand 2
A
43 46anti-parallel
Strand 3
A
87 90anti-parallel
Strand 4
A
113 115anti-parallel
Strand 5
A
58 62anti-parallel
Strand 6
A
152 156anti-parallel
Strand 7
A
145 146anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 225first strand
Strand 2
A
230 236anti-parallel
Strand 3
A
242 246anti-parallel
Strand 4
A
296 299anti-parallel
Strand 5
A
284 287anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 305first strand
Strand 2
A
359 361anti-parallel
Strand 3
A
367 369anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
725 727first strand
Strand 2
A
733 737anti-parallel
Strand 3
A
740 741anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 46first strand
Strand 2
B
87 90anti-parallel
Strand 3
B
113 115anti-parallel
Strand 4
B
58 62anti-parallel
Strand 5
B
152 156anti-parallel
Strand 6
B
145 146anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
217 224first strand
Strand 2
B
231 236anti-parallel
Strand 3
B
243 246anti-parallel
Strand 4
B
294 299anti-parallel
Strand 5
B
284 289anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
304 305first strand
Strand 2
B
359 361anti-parallel
Strand 3
B
367 369anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
726 727first strand
Strand 2
B
733 737anti-parallel
Strand 3
B
740 742anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
823 824first strand
Strand 2
B
831 832anti-parallel
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