Analysis of interatomic Contacts of Structural Units in PDB entry:
8WGY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8WGY entry

There are 7 chains in PDB entry 8WGY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	GLY 323	PRO 785
E	ILE 5	PRO 785
D	TRP 236	PRO 785
F	GLY 323	PRO 785
C	GLY 323	PRO 785
A	GLY 323	PRO 785
T	C 2	C 4

There are158 helices in PDB entry 8WGY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	324	336	Right-handed alpha
Helix 2	AA2	B	363	371	Right-handed alpha
Helix 3	AA3	B	376	382	Right-handed alpha
Helix 4	AA4	B	385	400	Right-handed alpha
Helix 5	AA5	B	430	435	Right-handed alpha
Helix 6	AA6	B	455	469	Right-handed alpha
Helix 7	AA7	B	472	474	Right-handed 310
Helix 8	AA8	B	475	488	Right-handed alpha
Helix 9	AA9	B	489	491	Right-handed 310
Helix 10	AB1	B	508	521	Right-handed alpha
Helix 11	AB2	B	529	534	Right-handed alpha
Helix 12	AB3	B	541	546	Right-handed alpha
Helix 13	AB4	B	560	564	Right-handed 310
Helix 14	AB5	B	570	578	Right-handed alpha
Helix 15	AB6	B	614	619	Right-handed alpha
Helix 16	AB7	B	635	641	Right-handed alpha
Helix 17	AB8	B	654	661	Right-handed alpha
Helix 18	AB9	B	664	680	Right-handed alpha
Helix 19	AC1	B	689	695	Right-handed 310
Helix 20	AC2	B	696	703	Right-handed alpha
Helix 21	AC3	B	710	714	Right-handed 310
Helix 22	AC4	B	716	723	Right-handed alpha
Helix 23	AC5	B	735	744	Right-handed alpha
Helix 24	AC6	B	752	763	Right-handed alpha
Helix 25	AC7	B	779	784	Right-handed alpha
Helix 26	AC8	E	20	27	Right-handed alpha
Helix 27	AC9	E	36	47	Right-handed alpha
Helix 28	AD1	E	78	105	Right-handed alpha
Helix 29	AD2	E	108	119	Right-handed alpha
Helix 30	AD3	E	143	160	Right-handed alpha
Helix 31	AD4	E	163	168	Right-handed alpha
Helix 32	AD5	E	204	208	Right-handed 310
Helix 33	AD6	E	242	255	Right-handed alpha
Helix 34	AD7	E	324	335	Right-handed alpha
Helix 35	AD8	E	363	371	Right-handed alpha
Helix 36	AD9	E	372	375	Right-handed 310
Helix 37	AE1	E	376	381	Right-handed alpha
Helix 38	AE2	E	385	400	Right-handed alpha
Helix 39	AE3	E	429	434	Right-handed 310
Helix 40	AE4	E	455	469	Right-handed alpha
Helix 41	AE5	E	475	489	Right-handed alpha
Helix 42	AE6	E	508	521	Right-handed alpha
Helix 43	AE7	E	529	534	Right-handed alpha
Helix 44	AE8	E	541	546	Right-handed alpha
Helix 45	AE9	E	570	578	Right-handed alpha
Helix 46	AF1	E	615	619	Right-handed 310
Helix 47	AF2	E	632	634	Right-handed 310
Helix 48	AF3	E	635	642	Right-handed alpha
Helix 49	AF4	E	653	661	Right-handed alpha
Helix 50	AF5	E	664	680	Right-handed alpha
Helix 51	AF6	E	694	705	Right-handed alpha
Helix 52	AF7	E	713	715	Right-handed 310
Helix 53	AF8	E	716	724	Right-handed alpha
Helix 54	AF9	E	735	744	Right-handed alpha
Helix 55	AG1	E	748	763	Right-handed alpha
Helix 56	AG2	E	779	784	Right-handed alpha
Helix 57	AG3	D	242	255	Right-handed alpha
Helix 58	AG4	D	310	314	Right-handed 310
Helix 59	AG5	D	324	335	Right-handed alpha
Helix 60	AG6	D	363	372	Right-handed alpha
Helix 61	AG7	D	376	381	Right-handed alpha
Helix 62	AG8	D	382	384	Right-handed 310
Helix 63	AG9	D	385	400	Right-handed alpha
Helix 64	AH1	D	430	435	Right-handed alpha
Helix 65	AH2	D	455	469	Right-handed alpha
Helix 66	AH3	D	472	474	Right-handed 310
Helix 67	AH4	D	475	488	Right-handed alpha
Helix 68	AH5	D	489	491	Right-handed 310
Helix 69	AH6	D	508	521	Right-handed alpha
Helix 70	AH7	D	528	533	Right-handed 310
Helix 71	AH8	D	541	546	Right-handed alpha
Helix 72	AH9	D	570	578	Right-handed alpha
Helix 73	AI1	D	616	619	Right-handed 310
Helix 74	AI2	D	635	641	Right-handed alpha
Helix 75	AI3	D	654	661	Right-handed alpha
Helix 76	AI4	D	664	680	Right-handed alpha
Helix 77	AI5	D	689	693	Right-handed 310
Helix 78	AI6	D	697	705	Right-handed alpha
Helix 79	AI7	D	716	723	Right-handed alpha
Helix 80	AI8	D	727	731	Right-handed 310
Helix 81	AI9	D	735	747	Right-handed alpha
Helix 82	AJ1	D	753	764	Right-handed alpha
Helix 83	AJ2	D	779	784	Right-handed alpha
Helix 84	AJ3	F	324	336	Right-handed alpha
Helix 85	AJ4	F	363	371	Right-handed alpha
Helix 86	AJ5	F	376	381	Right-handed alpha
Helix 87	AJ6	F	382	384	Right-handed 310
Helix 88	AJ7	F	385	401	Right-handed alpha
Helix 89	AJ8	F	429	434	Right-handed 310
Helix 90	AJ9	F	447	451	Right-handed 310
Helix 91	AK1	F	455	469	Right-handed alpha
Helix 92	AK2	F	475	488	Right-handed alpha
Helix 93	AK3	F	508	520	Right-handed alpha
Helix 94	AK4	F	530	533	Right-handed 310
Helix 95	AK5	F	542	547	Right-handed alpha
Helix 96	AK6	F	570	577	Right-handed alpha
Helix 97	AK7	F	614	619	Right-handed alpha
Helix 98	AK8	F	635	640	Right-handed alpha
Helix 99	AK9	F	654	661	Right-handed alpha
Helix 100	AL1	F	664	680	Right-handed alpha
Helix 101	AL2	F	689	692	Right-handed 310
Helix 102	AL3	F	693	705	Right-handed alpha
Helix 103	AL4	F	710	714	Right-handed 310
Helix 104	AL5	F	717	722	Right-handed alpha
Helix 105	AL6	F	735	744	Right-handed alpha
Helix 106	AL7	F	748	763	Right-handed alpha
Helix 107	AL8	F	779	784	Right-handed alpha
Helix 108	AL9	C	324	336	Right-handed alpha
Helix 109	AM1	C	363	372	Right-handed alpha
Helix 110	AM2	C	373	375	Right-handed 310
Helix 111	AM3	C	376	382	Right-handed alpha
Helix 112	AM4	C	385	400	Right-handed alpha
Helix 113	AM5	C	430	435	Right-handed alpha
Helix 114	AM6	C	447	451	Right-handed 310
Helix 115	AM7	C	455	469	Right-handed alpha
Helix 116	AM8	C	472	474	Right-handed 310
Helix 117	AM9	C	475	488	Right-handed alpha
Helix 118	AN1	C	508	521	Right-handed alpha
Helix 119	AN2	C	529	534	Right-handed alpha
Helix 120	AN3	C	541	546	Right-handed alpha
Helix 121	AN4	C	570	579	Right-handed alpha
Helix 122	AN5	C	614	619	Right-handed alpha
Helix 123	AN6	C	635	641	Right-handed alpha
Helix 124	AN7	C	654	661	Right-handed alpha
Helix 125	AN8	C	664	680	Right-handed alpha
Helix 126	AN9	C	693	695	Right-handed 310
Helix 127	AO1	C	696	703	Right-handed alpha
Helix 128	AO2	C	710	715	Right-handed 310
Helix 129	AO3	C	716	724	Right-handed alpha
Helix 130	AO4	C	736	745	Right-handed alpha
Helix 131	AO5	C	752	764	Right-handed alpha
Helix 132	AO6	C	779	784	Right-handed alpha
Helix 133	AO7	A	324	335	Right-handed alpha
Helix 134	AO8	A	363	372	Right-handed alpha
Helix 135	AO9	A	373	375	Right-handed 310
Helix 136	AP1	A	376	381	Right-handed alpha
Helix 137	AP2	A	382	384	Right-handed 310
Helix 138	AP3	A	385	400	Right-handed alpha
Helix 139	AP4	A	430	435	Right-handed alpha
Helix 140	AP5	A	455	469	Right-handed alpha
Helix 141	AP6	A	472	474	Right-handed 310
Helix 142	AP7	A	475	488	Right-handed alpha
Helix 143	AP8	A	489	491	Right-handed 310
Helix 144	AP9	A	508	521	Right-handed alpha
Helix 145	AQ1	A	529	534	Right-handed alpha
Helix 146	AQ2	A	541	546	Right-handed alpha
Helix 147	AQ3	A	570	577	Right-handed alpha
Helix 148	AQ4	A	614	619	Right-handed alpha
Helix 149	AQ5	A	635	640	Right-handed alpha
Helix 150	AQ6	A	654	661	Right-handed alpha
Helix 151	AQ7	A	664	680	Right-handed alpha
Helix 152	AQ8	A	689	695	Right-handed 310
Helix 153	AQ9	A	696	705	Right-handed alpha
Helix 154	AR1	A	710	714	Right-handed 310
Helix 155	AR2	A	716	724	Right-handed alpha
Helix 156	AR3	A	736	747	Right-handed alpha
Helix 157	AR4	A	752	764	Right-handed alpha
Helix 158	AR5	A	779	784	Right-handed alpha

There are 48 sheets in PDB entry 8WGY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	341	first strand
Strand 2	B	347	350	anti-parallel
Strand 3	B	355	356	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	412	415	first strand
Strand 2	B	418	421	anti-parallel
Strand 3	B	427	428	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	601	604	first strand
Strand 2	B	498	503	parallel
Strand 3	B	621	626	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	581	583	first strand
Strand 2	B	593	595	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	629	631	first strand
Strand 2	B	648	650	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	706	708	first strand
Strand 2	B	776	778	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	726	728	first strand
Strand 2	B	731	733	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	32	35	first strand
Strand 2	E	11	14	anti-parallel
Strand 3	E	53	54	anti-parallel
Strand 4	E	180	181	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	65	73	first strand
Strand 2	E	131	142	anti-parallel
Strand 3	E	121	122	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	65	73	first strand
Strand 2	E	131	142	anti-parallel
Strand 3	E	219	220	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	124	125	first strand
Strand 2	E	195	196	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	294	299	first strand
Strand 2	E	302	307	anti-parallel
Strand 3	E	317	320	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	339	341	first strand
Strand 2	E	347	350	anti-parallel
Strand 3	E	355	356	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	412	415	first strand
Strand 2	E	418	421	anti-parallel
Strand 3	E	427	428	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	525	527	first strand
Strand 2	E	552	556	parallel
Strand 3	E	599	604	parallel
Strand 4	E	498	503	parallel
Strand 5	E	621	626	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	581	583	first strand
Strand 2	E	593	595	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	629	631	first strand
Strand 2	E	648	650	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	706	707	first strand
Strand 2	E	777	778	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	727	728	first strand
Strand 2	E	731	732	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	295	299	first strand
Strand 2	D	302	306	anti-parallel
Strand 3	D	317	320	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	339	341	first strand
Strand 2	D	347	350	anti-parallel
Strand 3	D	355	356	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	412	415	first strand
Strand 2	D	418	421	anti-parallel
Strand 3	D	427	428	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	524	526	first strand
Strand 2	D	552	556	parallel
Strand 3	D	599	604	parallel
Strand 4	D	498	503	parallel
Strand 5	D	621	626	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	581	583	first strand
Strand 2	D	593	595	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	628	631	first strand
Strand 2	D	647	650	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	706	707	first strand
Strand 2	D	777	778	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	339	342	first strand
Strand 2	F	346	349	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	412	415	first strand
Strand 2	F	418	421	anti-parallel
Strand 3	F	426	428	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	524	528	first strand
Strand 2	F	552	556	parallel
Strand 3	F	599	604	parallel
Strand 4	F	498	502	parallel
Strand 5	F	621	625	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	581	583	first strand
Strand 2	F	593	595	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	628	631	first strand
Strand 2	F	647	650	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	706	708	first strand
Strand 2	F	776	778	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	726	728	first strand
Strand 2	F	731	733	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	765	766	first strand
Strand 2	F	772	773	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	341	first strand
Strand 2	C	347	351	anti-parallel
Strand 3	C	354	356	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	412	415	first strand
Strand 2	C	418	421	anti-parallel
Strand 3	C	427	428	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	524	526	first strand
Strand 2	C	552	556	parallel
Strand 3	C	599	604	parallel
Strand 4	C	498	502	parallel
Strand 5	C	621	625	parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	581	583	first strand
Strand 2	C	593	595	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	629	631	first strand
Strand 2	C	648	650	parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	706	708	first strand
Strand 2	C	776	778	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	734	735	first strand
Strand 2	C	773	774	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	341	first strand
Strand 2	A	347	351	anti-parallel
Strand 3	A	354	356	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	412	415	first strand
Strand 2	A	418	421	anti-parallel
Strand 3	A	427	428	anti-parallel

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There are 5 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	524	526	first strand
Strand 2	A	552	556	parallel
Strand 3	A	599	604	parallel
Strand 4	A	498	503	parallel
Strand 5	A	621	626	parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	581	583	first strand
Strand 2	A	593	595	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	628	631	first strand
Strand 2	A	647	650	parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	706	708	first strand
Strand 2	A	776	778	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	726	728	first strand
Strand 2	A	731	735	anti-parallel
Strand 3	A	773	774	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8WGY

Analysis of interatomic Contacts of Structural Units in PDB entry:
8WGY