Analysis of interatomic Contacts of Structural Units in PDB entry:
8WH8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8WH8 entry

There are 11 chains in PDB entry 8WH8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 41	ARG 134
B	ASN 25	GLY 101
C	LYS 21	VAL 108
D	THR 61	SER 149
E	GLU 50	ARG 134
F	GLY 13	PHE 100
G	ARG 18	PRO 110
H	SER 58	SER 149
I	C 10	T 134
J	A 14	G 138
K	LYS 203	GLY 676

There are 51 helices in PDB entry 8WH8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	44	57	Right-handed alpha
Helix 2	AA2	A	63	77	Right-handed alpha
Helix 3	AA3	A	85	114	Right-handed alpha
Helix 4	AA4	A	120	132	Right-handed alpha
Helix 5	AA5	B	25	29	Right-handed 310
Helix 6	AA6	B	30	42	Right-handed alpha
Helix 7	AA7	B	49	76	Right-handed alpha
Helix 8	AA8	B	84	93	Right-handed alpha
Helix 9	AA9	C	27	37	Right-handed alpha
Helix 10	AB1	C	38	40	Right-handed 310
Helix 11	AB2	C	46	75	Right-handed alpha
Helix 12	AB3	C	80	91	Right-handed alpha
Helix 13	AB4	C	93	98	Right-handed alpha
Helix 14	AB5	D	62	74	Right-handed alpha
Helix 15	AB6	D	80	109	Right-handed alpha
Helix 16	AB7	D	115	127	Right-handed alpha
Helix 17	AB8	D	129	149	Right-handed alpha
Helix 18	AB9	E	51	55	Right-handed alpha
Helix 19	AC1	E	64	77	Right-handed alpha
Helix 20	AC2	E	87	114	Right-handed alpha
Helix 21	AC3	E	120	132	Right-handed alpha
Helix 22	AC4	F	30	40	Right-handed alpha
Helix 23	AC5	F	50	75	Right-handed alpha
Helix 24	AC6	F	82	92	Right-handed alpha
Helix 25	AC7	G	27	38	Right-handed alpha
Helix 26	AC8	G	46	75	Right-handed alpha
Helix 27	AC9	G	80	91	Right-handed alpha
Helix 28	AD1	G	92	98	Right-handed alpha
Helix 29	AD2	H	62	74	Right-handed alpha
Helix 30	AD3	H	83	109	Right-handed alpha
Helix 31	AD4	H	115	126	Right-handed alpha
Helix 32	AD5	H	129	148	Right-handed alpha
Helix 33	AD6	K	204	220	Right-handed alpha
Helix 34	AD7	K	234	244	Right-handed alpha
Helix 35	AD8	K	258	272	Right-handed alpha
Helix 36	AD9	K	286	294	Right-handed alpha
Helix 37	AE1	K	310	317	Right-handed alpha
Helix 38	AE2	K	317	323	Right-handed alpha
Helix 39	AE3	K	334	339	Right-handed 310
Helix 40	AE4	K	343	352	Right-handed alpha
Helix 41	AE5	K	369	380	Right-handed alpha
Helix 42	AE6	K	416	425	Right-handed alpha
Helix 43	AE7	K	453	465	Right-handed alpha
Helix 44	AE8	K	488	499	Right-handed alpha
Helix 45	AE9	K	500	508	Right-handed alpha
Helix 46	AF1	K	518	522	Right-handed 310
Helix 47	AF2	K	523	536	Right-handed alpha
Helix 48	AF3	K	550	564	Right-handed alpha
Helix 49	AF4	K	575	587	Right-handed alpha
Helix 50	AF5	K	623	635	Right-handed alpha
Helix 51	AF6	K	653	676	Right-handed alpha

There are 10 sheets in PDB entry 8WH8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	84	first strand
Strand 2	F	80	81	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	118	119	first strand
Strand 2	F	45	46	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	46	first strand
Strand 2	E	118	119	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	44	first strand
Strand 2	D	113	114	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	79	first strand
Strand 2	D	78	79	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	97	98	first strand
Strand 2	G	102	103	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	43	44	first strand
Strand 2	H	113	114	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	278	280	first strand
Strand 2	K	306	309	parallel
Strand 3	K	254	256	parallel
Strand 4	K	330	332	parallel
Strand 5	K	357	359	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	443	450	first strand
Strand 2	K	643	650	parallel
Strand 3	K	614	617	parallel
Strand 4	K	543	546	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	567	570	first strand
Strand 2	K	595	598	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8WH8

Analysis of interatomic Contacts of Structural Units in PDB entry:
8WH8