Analysis of interatomic Contacts of Structural Units in PDB entry:
8WHG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8WHG entry

There are 8 chains in PDB entry 8WHG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 7	PRO 295
B	ASN 5	PRO 295
C	ALA 7	PRO 295
D	ALA 6	PRO 295
E	ALA 7	PRO 295
F	ALA 7	PRO 295
G	ALA 7	PRO 295
H	ALA 136	PRO 295

There are124 helices in PDB entry 8WHG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	17	30	Right-handed alpha
Helix 2	AA2	A	40	43	Right-handed 310
Helix 3	AA3	A	44	50	Right-handed alpha
Helix 4	AA4	A	57	65	Right-handed alpha
Helix 5	AA5	A	74	83	Right-handed alpha
Helix 6	AA6	A	84	86	Right-handed 310
Helix 7	AA7	A	101	115	Right-handed alpha
Helix 8	AA8	A	127	131	Right-handed 310
Helix 9	AA9	A	143	150	Right-handed alpha
Helix 10	AB1	A	150	155	Right-handed alpha
Helix 11	AB2	A	156	158	Right-handed 310
Helix 12	AB3	A	170	200	Right-handed alpha
Helix 13	AB4	A	203	232	Right-handed alpha
Helix 14	AB5	A	240	259	Right-handed alpha
Helix 15	AB6	A	262	278	Right-handed alpha
Helix 16	AB7	A	284	286	Right-handed 310
Helix 17	AB8	A	287	293	Right-handed alpha
Helix 18	AB9	B	17	30	Right-handed alpha
Helix 19	AC1	B	40	43	Right-handed 310
Helix 20	AC2	B	44	51	Right-handed alpha
Helix 21	AC3	B	57	65	Right-handed alpha
Helix 22	AC4	B	74	83	Right-handed alpha
Helix 23	AC5	B	84	86	Right-handed 310
Helix 24	AC6	B	101	115	Right-handed alpha
Helix 25	AC7	B	127	131	Right-handed 310
Helix 26	AC8	B	143	155	Right-handed alpha
Helix 27	AC9	B	156	158	Right-handed 310
Helix 28	AD1	B	169	200	Right-handed alpha
Helix 29	AD2	B	203	232	Right-handed alpha
Helix 30	AD3	B	240	259	Right-handed alpha
Helix 31	AD4	B	262	278	Right-handed alpha
Helix 32	AD5	B	284	287	Right-handed 310
Helix 33	AD6	B	288	294	Right-handed alpha
Helix 34	AD7	C	17	30	Right-handed alpha
Helix 35	AD8	C	40	43	Right-handed 310
Helix 36	AD9	C	44	50	Right-handed alpha
Helix 37	AE1	C	57	65	Right-handed alpha
Helix 38	AE2	C	74	83	Right-handed alpha
Helix 39	AE3	C	84	86	Right-handed 310
Helix 40	AE4	C	101	115	Right-handed alpha
Helix 41	AE5	C	127	131	Right-handed 310
Helix 42	AE6	C	143	150	Right-handed alpha
Helix 43	AE7	C	150	156	Right-handed alpha
Helix 44	AE8	C	169	200	Right-handed alpha
Helix 45	AE9	C	203	232	Right-handed alpha
Helix 46	AF1	C	240	258	Right-handed alpha
Helix 47	AF2	C	262	278	Right-handed alpha
Helix 48	AF3	C	284	287	Right-handed 310
Helix 49	AF4	C	288	293	Right-handed alpha
Helix 50	AF5	D	17	31	Right-handed alpha
Helix 51	AF6	D	40	43	Right-handed 310
Helix 52	AF7	D	44	50	Right-handed alpha
Helix 53	AF8	D	57	65	Right-handed alpha
Helix 54	AF9	D	74	83	Right-handed alpha
Helix 55	AG1	D	84	90	Right-handed 310
Helix 56	AG2	D	101	115	Right-handed alpha
Helix 57	AG3	D	127	131	Right-handed 310
Helix 58	AG4	D	143	150	Right-handed alpha
Helix 59	AG5	D	150	155	Right-handed alpha
Helix 60	AG6	D	156	158	Right-handed 310
Helix 61	AG7	D	168	199	Right-handed alpha
Helix 62	AG8	D	203	232	Right-handed alpha
Helix 63	AG9	D	240	258	Right-handed alpha
Helix 64	AH1	D	262	278	Right-handed alpha
Helix 65	AH2	D	284	287	Right-handed 310
Helix 66	AH3	D	288	294	Right-handed alpha
Helix 67	AH4	E	17	30	Right-handed alpha
Helix 68	AH5	E	40	43	Right-handed 310
Helix 69	AH6	E	44	50	Right-handed alpha
Helix 70	AH7	E	57	65	Right-handed alpha
Helix 71	AH8	E	74	83	Right-handed alpha
Helix 72	AH9	E	84	86	Right-handed 310
Helix 73	AI1	E	101	115	Right-handed alpha
Helix 74	AI2	E	127	131	Right-handed 310
Helix 75	AI3	E	143	150	Right-handed alpha
Helix 76	AI4	E	150	155	Right-handed alpha
Helix 77	AI5	E	156	158	Right-handed 310
Helix 78	AI6	E	169	199	Right-handed alpha
Helix 79	AI7	E	203	232	Right-handed alpha
Helix 80	AI8	E	240	258	Right-handed alpha
Helix 81	AI9	E	262	278	Right-handed alpha
Helix 82	AJ1	E	284	287	Right-handed 310
Helix 83	AJ2	E	288	294	Right-handed alpha
Helix 84	AJ3	F	17	30	Right-handed alpha
Helix 85	AJ4	F	40	43	Right-handed 310
Helix 86	AJ5	F	44	50	Right-handed alpha
Helix 87	AJ6	F	58	63	Right-handed alpha
Helix 88	AJ7	F	74	83	Right-handed alpha
Helix 89	AJ8	F	101	115	Right-handed alpha
Helix 90	AJ9	F	127	131	Right-handed 310
Helix 91	AK1	F	145	146	Right-handed 310
Helix 92	AK2	F	148	149	Right-handed 310
Helix 93	AK3	F	150	155	Right-handed alpha
Helix 94	AK4	F	156	158	Right-handed 310
Helix 95	AK5	F	169	199	Right-handed alpha
Helix 96	AK6	F	203	232	Right-handed alpha
Helix 97	AK7	F	240	258	Right-handed alpha
Helix 98	AK8	F	262	278	Right-handed alpha
Helix 99	AK9	F	284	286	Right-handed 310
Helix 100	AL1	F	287	292	Right-handed alpha
Helix 101	AL2	G	17	30	Right-handed alpha
Helix 102	AL3	G	40	43	Right-handed 310
Helix 103	AL4	G	44	50	Right-handed alpha
Helix 104	AL5	G	57	65	Right-handed alpha
Helix 105	AL6	G	74	83	Right-handed alpha
Helix 106	AL7	G	84	86	Right-handed 310
Helix 107	AL8	G	101	115	Right-handed alpha
Helix 108	AL9	G	127	131	Right-handed 310
Helix 109	AM1	G	143	155	Right-handed alpha
Helix 110	AM2	G	169	198	Right-handed alpha
Helix 111	AM3	G	199	201	Right-handed 310
Helix 112	AM4	G	203	232	Right-handed alpha
Helix 113	AM5	G	240	258	Right-handed alpha
Helix 114	AM6	G	262	278	Right-handed alpha
Helix 115	AM7	G	284	287	Right-handed 310
Helix 116	AM8	G	288	294	Right-handed alpha
Helix 117	AM9	H	143	150	Right-handed alpha
Helix 118	AN1	H	153	158	Right-handed 310
Helix 119	AN2	H	170	200	Right-handed alpha
Helix 120	AN3	H	203	232	Right-handed alpha
Helix 121	AN4	H	240	259	Right-handed alpha
Helix 122	AN5	H	262	278	Right-handed alpha
Helix 123	AN6	H	284	287	Right-handed 310
Helix 124	AN7	H	288	294	Right-handed alpha

There are 7 sheets in PDB entry 8WHG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	54	first strand
Strand 2	A	34	37	parallel
Strand 3	A	11	14	parallel
Strand 4	A	67	70	parallel
Strand 5	A	93	96	parallel
Strand 6	A	118	124	parallel
Strand 7	A	138	141	anti-parallel
Strand 8	A	162	166	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	54	first strand
Strand 2	B	34	37	parallel
Strand 3	B	11	14	parallel
Strand 4	B	67	70	parallel
Strand 5	B	93	96	parallel
Strand 6	B	118	125	parallel
Strand 7	B	137	141	anti-parallel
Strand 8	B	162	164	parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	54	first strand
Strand 2	C	34	37	parallel
Strand 3	C	11	14	parallel
Strand 4	C	67	70	parallel
Strand 5	C	93	96	parallel
Strand 6	C	118	125	parallel
Strand 7	C	137	141	anti-parallel
Strand 8	C	162	166	parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	54	first strand
Strand 2	D	34	37	parallel
Strand 3	D	11	14	parallel
Strand 4	D	67	70	parallel
Strand 5	D	93	96	parallel
Strand 6	D	118	124	parallel
Strand 7	D	138	141	anti-parallel
Strand 8	D	162	166	parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	53	54	first strand
Strand 2	E	34	37	parallel
Strand 3	E	11	14	parallel
Strand 4	E	67	70	parallel
Strand 5	E	93	96	parallel
Strand 6	E	118	124	parallel
Strand 7	E	138	141	anti-parallel
Strand 8	E	162	164	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	14	first strand
Strand 2	F	67	70	parallel
Strand 3	F	94	96	parallel
Strand 4	F	120	124	parallel
Strand 5	F	138	141	anti-parallel
Strand 6	F	162	164	parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	53	54	first strand
Strand 2	G	34	37	parallel
Strand 3	G	11	14	parallel
Strand 4	G	67	70	parallel
Strand 5	G	93	96	parallel
Strand 6	G	118	124	parallel
Strand 7	G	138	141	anti-parallel
Strand 8	G	162	164	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8WHG

Analysis of interatomic Contacts of Structural Units in PDB entry:
8WHG