Analysis of interatomic Contacts of Structural Units in PDB entry:
8WHI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WHI entry

There are 3 chains in PDB entry 8WHI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 1250GLY 1478
E
 THR 350GLU 447
F
 THR 350ASP 454
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 8WHI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1253 1266Right-handed alpha
Helix 2
AA2
A
1271 1288Right-handed alpha
Helix 3
AA3
A
1292 1309Right-handed alpha
Helix 4
AA4
A
1313 1331Right-handed alpha
Helix 5
AA5
A
1332 1337Right-handed 310
Helix 6
AA6
A
1338 1349Right-handed alpha
Helix 7
AA7
A
1350 1352Right-handed 310
Helix 8
AA8
A
1354 1372Right-handed alpha
Helix 9
AA9
A
1373 1388Right-handed alpha
Helix 10
AB1
A
1391 1405Right-handed alpha
Helix 11
AB2
A
1408 1427Right-handed alpha
Helix 12
AB3
A
1431 1450Right-handed alpha
Helix 13
AB4
A
1451 1458Right-handed 310
Helix 14
AB5
A
1461 1477Right-handed alpha
Helix 15
AB6
E
351 446Right-handed alpha
Helix 16
AB7
F
351 454Right-handed alpha
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There are no sheets in PDB entry 8WHI
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il