Analysis of interatomic Contacts of Structural Units in PDB entry:
8WHL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WHL entry

There are 8 chains in PDB entry 8WHL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASP 1253GLY 1478
D
 ASP 1253GLY 1478
F
 GLU 494GLN 548
H
 GLU 494GLN 548
C
 SER 1255THR 1477
G
 ILE 496ASP 547
A
 SER 1251GLY 1478
E
 ILE 496ASP 547
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 8WHL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
1253 1266Right-handed alpha
Helix 2
AA2
B
1271 1288Right-handed alpha
Helix 3
AA3
B
1290 1308Right-handed alpha
Helix 4
AA4
B
1309 1311Right-handed 310
Helix 5
AA5
B
1313 1331Right-handed alpha
Helix 6
AA6
B
1332 1337Right-handed 310
Helix 7
AA7
B
1338 1349Right-handed alpha
Helix 8
AA8
B
1350 1352Right-handed 310
Helix 9
AA9
B
1354 1372Right-handed alpha
Helix 10
AB1
B
1373 1388Right-handed alpha
Helix 11
AB2
B
1391 1405Right-handed alpha
Helix 12
AB3
B
1408 1428Right-handed alpha
Helix 13
AB4
B
1431 1450Right-handed alpha
Helix 14
AB5
B
1451 1458Right-handed 310
Helix 15
AB6
B
1461 1478Right-handed alpha
Helix 16
AB7
D
1254 1266Right-handed alpha
Helix 17
AB8
D
1271 1288Right-handed alpha
Helix 18
AB9
D
1290 1309Right-handed alpha
Helix 19
AC1
D
1313 1331Right-handed alpha
Helix 20
AC2
D
1332 1337Right-handed 310
Helix 21
AC3
D
1338 1350Right-handed alpha
Helix 22
AC4
D
1354 1372Right-handed alpha
Helix 23
AC5
D
1373 1388Right-handed alpha
Helix 24
AC6
D
1391 1405Right-handed alpha
Helix 25
AC7
D
1408 1428Right-handed alpha
Helix 26
AC8
D
1431 1450Right-handed alpha
Helix 27
AC9
D
1451 1458Right-handed 310
Helix 28
AD1
D
1461 1478Right-handed alpha
Helix 29
AD2
F
495 548Right-handed alpha
Helix 30
AD3
H
495 548Right-handed alpha
Helix 31
AD4
C
1256 1266Right-handed alpha
Helix 32
AD5
C
1271 1288Right-handed alpha
Helix 33
AD6
C
1293 1309Right-handed alpha
Helix 34
AD7
C
1313 1331Right-handed alpha
Helix 35
AD8
C
1332 1337Right-handed 310
Helix 36
AD9
C
1338 1350Right-handed alpha
Helix 37
AE1
C
1354 1372Right-handed alpha
Helix 38
AE2
C
1373 1388Right-handed alpha
Helix 39
AE3
C
1391 1405Right-handed alpha
Helix 40
AE4
C
1408 1428Right-handed alpha
Helix 41
AE5
C
1431 1450Right-handed alpha
Helix 42
AE6
C
1451 1460Right-handed 310
Helix 43
AE7
C
1461 1477Right-handed alpha
Helix 44
AE8
G
497 547Right-handed alpha
Helix 45
AE9
A
1253 1266Right-handed alpha
Helix 46
AF1
A
1271 1288Right-handed alpha
Helix 47
AF2
A
1290 1309Right-handed alpha
Helix 48
AF3
A
1313 1331Right-handed alpha
Helix 49
AF4
A
1332 1337Right-handed 310
Helix 50
AF5
A
1338 1350Right-handed alpha
Helix 51
AF6
A
1354 1372Right-handed alpha
Helix 52
AF7
A
1373 1388Right-handed alpha
Helix 53
AF8
A
1391 1405Right-handed alpha
Helix 54
AF9
A
1408 1428Right-handed alpha
Helix 55
AG1
A
1431 1450Right-handed alpha
Helix 56
AG2
A
1451 1460Right-handed 310
Helix 57
AG3
A
1461 1478Right-handed alpha
Helix 58
AG4
E
497 547Right-handed alpha
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There are no sheets in PDB entry 8WHL
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