Analysis of interatomic Contacts of Structural Units in PDB entry:
8WHS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8WHS entry

There are 4 chains in PDB entry 8WHS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 23	GLU 1144
B	THR 23	GLU 1144
C	THR 23	GLU 1144
D	SER 19	ASP 615

There are 95 helices in PDB entry 8WHS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	294	304	Right-handed alpha
Helix 2	AA2	A	337	343	Right-handed alpha
Helix 3	AA3	A	365	371	Right-handed alpha
Helix 4	AA4	A	403	410	Right-handed alpha
Helix 5	AA5	A	502	506	Right-handed 310
Helix 6	AA6	A	616	627	Right-handed alpha
Helix 7	AA7	A	737	743	Right-handed alpha
Helix 8	AA8	A	746	755	Right-handed alpha
Helix 9	AA9	A	760	783	Right-handed alpha
Helix 10	AB1	A	816	825	Right-handed alpha
Helix 11	AB2	A	848	856	Right-handed alpha
Helix 12	AB3	A	868	882	Right-handed alpha
Helix 13	AB4	A	886	890	Right-handed 310
Helix 14	AB5	A	897	908	Right-handed alpha
Helix 15	AB6	A	912	919	Right-handed alpha
Helix 16	AB7	A	919	941	Right-handed alpha
Helix 17	AB8	A	945	965	Right-handed alpha
Helix 18	AB9	A	966	968	Right-handed 310
Helix 19	AC1	A	976	982	Right-handed alpha
Helix 20	AC2	A	985	1033	Right-handed alpha
Helix 21	AC3	B	294	304	Right-handed alpha
Helix 22	AC4	B	337	343	Right-handed alpha
Helix 23	AC5	B	366	371	Right-handed alpha
Helix 24	AC6	B	403	410	Right-handed alpha
Helix 25	AC7	B	542	546	Right-handed 310
Helix 26	AC8	B	616	627	Right-handed alpha
Helix 27	AC9	B	737	743	Right-handed alpha
Helix 28	AD1	B	746	755	Right-handed alpha
Helix 29	AD2	B	760	783	Right-handed alpha
Helix 30	AD3	B	816	825	Right-handed alpha
Helix 31	AD4	B	848	855	Right-handed alpha
Helix 32	AD5	B	866	881	Right-handed alpha
Helix 33	AD6	B	886	890	Right-handed 310
Helix 34	AD7	B	897	908	Right-handed alpha
Helix 35	AD8	B	912	919	Right-handed alpha
Helix 36	AD9	B	919	941	Right-handed alpha
Helix 37	AE1	B	945	965	Right-handed alpha
Helix 38	AE2	B	979	984	Right-handed alpha
Helix 39	AE3	B	985	1033	Right-handed alpha
Helix 40	AE4	B	1139	1144	Right-handed alpha
Helix 41	AE5	C	294	303	Right-handed alpha
Helix 42	AE6	C	337	343	Right-handed alpha
Helix 43	AE7	C	349	353	Right-handed 310
Helix 44	AE8	C	365	371	Right-handed alpha
Helix 45	AE9	C	383	387	Right-handed 310
Helix 46	AF1	C	403	410	Right-handed alpha
Helix 47	AF2	C	416	422	Right-handed alpha
Helix 48	AF3	C	502	506	Right-handed 310
Helix 49	AF4	C	618	627	Right-handed alpha
Helix 50	AF5	C	737	743	Right-handed alpha
Helix 51	AF6	C	746	755	Right-handed alpha
Helix 52	AF7	C	760	783	Right-handed alpha
Helix 53	AF8	C	816	825	Right-handed alpha
Helix 54	AF9	C	840	844	Right-handed 310
Helix 55	AG1	C	848	855	Right-handed alpha
Helix 56	AG2	C	866	885	Right-handed alpha
Helix 57	AG3	C	886	890	Right-handed 310
Helix 58	AG4	C	897	909	Right-handed alpha
Helix 59	AG5	C	913	919	Right-handed alpha
Helix 60	AG6	C	919	941	Right-handed alpha
Helix 61	AG7	C	945	964	Right-handed alpha
Helix 62	AG8	C	976	984	Right-handed alpha
Helix 63	AG9	C	985	1033	Right-handed alpha
Helix 64	AH1	D	20	53	Right-handed alpha
Helix 65	AH2	D	56	81	Right-handed alpha
Helix 66	AH3	D	84	88	Right-handed 310
Helix 67	AH4	D	90	102	Right-handed alpha
Helix 68	AH5	D	103	108	Right-handed 310
Helix 69	AH6	D	109	130	Right-handed alpha
Helix 70	AH7	D	147	154	Right-handed alpha
Helix 71	AH8	D	157	194	Right-handed alpha
Helix 72	AH9	D	198	205	Right-handed alpha
Helix 73	AI1	D	206	208	Right-handed 310
Helix 74	AI2	D	218	252	Right-handed alpha
Helix 75	AI3	D	265	267	Right-handed 310
Helix 76	AI4	D	276	280	Right-handed 310
Helix 77	AI5	D	293	300	Right-handed alpha
Helix 78	AI6	D	303	318	Right-handed alpha
Helix 79	AI7	D	324	331	Right-handed alpha
Helix 80	AI8	D	365	385	Right-handed alpha
Helix 81	AI9	D	389	393	Right-handed 310
Helix 82	AJ1	D	400	413	Right-handed alpha
Helix 83	AJ2	D	414	421	Right-handed alpha
Helix 84	AJ3	D	431	447	Right-handed alpha
Helix 85	AJ4	D	448	465	Right-handed alpha
Helix 86	AJ5	D	469	471	Right-handed 310
Helix 87	AJ6	D	472	485	Right-handed alpha
Helix 88	AJ7	D	498	503	Right-handed 310
Helix 89	AJ8	D	505	509	Right-handed 310
Helix 90	AJ9	D	512	533	Right-handed alpha
Helix 91	AK1	D	538	542	Right-handed 310
Helix 92	AK2	D	547	559	Right-handed alpha
Helix 93	AK3	D	565	575	Right-handed alpha
Helix 94	AK4	D	581	599	Right-handed alpha
Helix 95	AK5	D	600	602	Right-handed 310

There are 57 sheets in PDB entry 8WHS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	30	first strand
Strand 2	A	61	65	anti-parallel
Strand 3	A	264	269	anti-parallel
Strand 4	A	90	93	anti-parallel
Strand 5	A	189	195	anti-parallel
Strand 6	A	201	208	anti-parallel
Strand 7	A	225	229	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	43	first strand
Strand 2	B	565	566	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	55	first strand
Strand 2	A	271	279	anti-parallel
Strand 3	A	285	290	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	238	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	105	107	first strand
Strand 2	A	116	118	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	130	first strand
Strand 2	A	167	170	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	316	first strand
Strand 2	A	595	599	anti-parallel
Strand 3	A	609	612	anti-parallel
Strand 4	A	650	651	anti-parallel
Strand 5	A	642	643	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	326	first strand
Strand 2	A	538	543	parallel
Strand 3	A	546	551	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	358	first strand
Strand 2	A	395	402	anti-parallel
Strand 3	A	508	515	anti-parallel
Strand 4	A	431	437	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	361	362	first strand
Strand 2	A	524	525	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	492	494	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	474	first strand
Strand 2	A	488	489	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	565	566	first strand
Strand 2	C	42	43	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	575	577	first strand
Strand 2	A	584	586	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	660	first strand
Strand 2	A	691	697	parallel
Strand 3	A	670	675	anti-parallel
Strand 4	A	664	665	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	701	702	first strand
Strand 2	C	787	788	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	713	715	first strand
Strand 2	A	1072	1074	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	718	728	first strand
Strand 2	A	1059	1069	anti-parallel
Strand 3	A	1047	1056	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	733	734	first strand
Strand 2	A	860	861	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1120	1122	first strand
Strand 2	A	1087	1090	anti-parallel
Strand 3	A	1081	1082	anti-parallel
Strand 4	A	1133	1134	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1094	1097	first strand
Strand 2	A	1102	1105	anti-parallel

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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	30	first strand
Strand 2	B	61	65	anti-parallel
Strand 3	B	264	269	anti-parallel
Strand 4	B	90	95	anti-parallel
Strand 5	B	189	195	anti-parallel
Strand 6	B	201	208	anti-parallel
Strand 7	B	224	229	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	55	first strand
Strand 2	B	271	278	anti-parallel
Strand 3	B	287	290	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	237	240	anti-parallel
Strand 3	B	104	107	anti-parallel
Strand 4	B	116	118	anti-parallel
Strand 5	B	128	131	anti-parallel
Strand 6	B	167	170	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	316	first strand
Strand 2	B	594	599	anti-parallel
Strand 3	B	609	613	anti-parallel
Strand 4	B	648	651	anti-parallel
Strand 5	B	642	645	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	358	first strand
Strand 2	B	395	402	anti-parallel
Strand 3	B	508	514	anti-parallel
Strand 4	B	431	437	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	391	392	first strand
Strand 2	B	524	525	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	453	first strand
Strand 2	B	493	494	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	538	541	first strand
Strand 2	B	548	551	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	575	577	first strand
Strand 2	B	584	586	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	660	first strand
Strand 2	B	691	697	parallel
Strand 3	B	671	675	anti-parallel
Strand 4	B	664	665	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	713	715	first strand
Strand 2	B	1072	1074	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	718	722	first strand
Strand 2	B	1059	1069	anti-parallel
Strand 3	B	725	728	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	718	722	first strand
Strand 2	B	1059	1069	anti-parallel
Strand 3	B	1047	1056	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	733	734	first strand
Strand 2	B	860	861	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1081	1082	first strand
Strand 2	B	1087	1090	anti-parallel
Strand 3	B	1120	1122	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1094	1097	first strand
Strand 2	B	1102	1105	anti-parallel

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There are 7 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	61	65	anti-parallel
Strand 3	C	264	269	anti-parallel
Strand 4	C	90	93	anti-parallel
Strand 5	C	189	195	anti-parallel
Strand 6	C	201	208	anti-parallel
Strand 7	C	224	229	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	55	first strand
Strand 2	C	271	279	anti-parallel
Strand 3	C	285	290	anti-parallel

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There are 6 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	237	238	anti-parallel
Strand 3	C	105	107	anti-parallel
Strand 4	C	116	118	anti-parallel
Strand 5	C	128	131	anti-parallel
Strand 6	C	167	170	anti-parallel

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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	316	first strand
Strand 2	C	594	599	anti-parallel
Strand 3	C	609	613	anti-parallel
Strand 4	C	648	651	anti-parallel
Strand 5	C	642	645	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	324	326	first strand
Strand 2	C	538	543	parallel
Strand 3	C	546	551	anti-parallel

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There are 5 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	358	first strand
Strand 2	C	395	402	anti-parallel
Strand 3	C	508	514	anti-parallel
Strand 4	C	431	437	anti-parallel
Strand 5	C	374	376	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	361	362	first strand
Strand 2	C	524	525	parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	452	454	first strand
Strand 2	C	492	494	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	473	474	first strand
Strand 2	C	488	489	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	575	577	first strand
Strand 2	C	584	586	anti-parallel

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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	655	first strand
Strand 2	C	691	696	parallel
Strand 3	C	670	675	anti-parallel
Strand 4	C	664	667	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	713	715	first strand
Strand 2	C	1072	1074	anti-parallel

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There are 3 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	718	728	first strand
Strand 2	C	1059	1069	anti-parallel
Strand 3	C	1047	1048	anti-parallel

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There are 3 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	718	728	first strand
Strand 2	C	1059	1069	anti-parallel
Strand 3	C	1052	1056	anti-parallel

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There are 2 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	733	734	first strand
Strand 2	C	860	861	anti-parallel

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There are 3 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1081	1082	first strand
Strand 2	C	1087	1090	anti-parallel
Strand 3	C	1120	1122	anti-parallel

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There are 2 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1095	1097	first strand
Strand 2	C	1102	1104	anti-parallel

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There are 2 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	131	133	first strand
Strand 2	D	141	143	anti-parallel

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There are 2 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	262	263	first strand
Strand 2	D	487	488	parallel

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There are 2 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	347	352	first strand
Strand 2	D	355	359	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8WHS

Analysis of interatomic Contacts of Structural Units in PDB entry:
8WHS