Analysis of interatomic Contacts of Structural Units in PDB entry:
8WI3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WI3 entry

There is 1 chain in PDB entry 8WI3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 97LYS 1436
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 8WI3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
99 103Right-handed 310
Helix 2
AA2
A
105 112Right-handed alpha
Helix 3
AA3
A
115 126Right-handed alpha
Helix 4
AA4
A
129 133Right-handed 310
Helix 5
AA5
A
141 160Right-handed alpha
Helix 6
AA6
A
166 175Right-handed alpha
Helix 7
AA7
A
175 193Right-handed alpha
Helix 8
AA8
A
194 210Right-handed alpha
Helix 9
AA9
A
215 263Right-handed alpha
Helix 10
AB1
A
282 293Right-handed alpha
Helix 11
AB2
A
299 315Right-handed alpha
Helix 12
AB3
A
316 320Right-handed 310
Helix 13
AB4
A
321 361Right-handed alpha
Helix 14
AB5
A
364 372Right-handed alpha
Helix 15
AB6
A
374 401Right-handed alpha
Helix 16
AB7
A
404 423Right-handed alpha
Helix 17
AB8
A
429 441Right-handed alpha
Helix 18
AB9
A
445 448Right-handed 310
Helix 19
AC1
A
449 471Right-handed alpha
Helix 20
AC2
A
600 609Right-handed alpha
Helix 21
AC3
A
638 645Right-handed alpha
Helix 22
AC4
A
651 661Right-handed alpha
Helix 23
AC5
A
663 670Right-handed alpha
Helix 24
AC6
A
686 702Right-handed alpha
Helix 25
AC7
A
716 728Right-handed alpha
Helix 26
AC8
A
745 749Right-handed 310
Helix 27
AC9
A
766 774Right-handed alpha
Helix 28
AD1
A
775 786Right-handed alpha
Helix 29
AD2
A
842 854Right-handed alpha
Helix 30
AD3
A
855 886Right-handed alpha
Helix 31
AD4
A
911 954Right-handed alpha
Helix 32
AD5
A
976 984Right-handed alpha
Helix 33
AD6
A
985 1011Right-handed alpha
Helix 34
AD7
A
1012 1015Right-handed 310
Helix 35
AD8
A
1018 1047Right-handed alpha
Helix 36
AD9
A
1047 1059Right-handed alpha
Helix 37
AE1
A
1060 1067Right-handed alpha
Helix 38
AE2
A
1070 1120Right-handed alpha
Helix 39
AE3
A
1125 1138Right-handed alpha
Helix 40
AE4
A
1142 1156Right-handed alpha
Helix 41
AE5
A
1158 1169Right-handed alpha
Helix 42
AE6
A
1232 1241Right-handed alpha
Helix 43
AE7
A
1262 1268Right-handed alpha
Helix 44
AE8
A
1284 1289Right-handed alpha
Helix 45
AE9
A
1295 1306Right-handed alpha
Helix 46
AF1
A
1308 1315Right-handed alpha
Helix 47
AF2
A
1317 1320Right-handed 310
Helix 48
AF3
A
1324 1328Right-handed 310
Helix 49
AF4
A
1331 1347Right-handed alpha
Helix 50
AF5
A
1361 1376Right-handed alpha
Helix 51
AF6
A
1387 1393Right-handed alpha
Helix 52
AF7
A
1410 1417Right-handed alpha
Helix 53
AF8
A
1420 1435Right-handed alpha
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There are 7 sheets in PDB entry 8WI3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
581 586first strand
Strand 2
A
488 495anti-parallel
Strand 3
A
618 621anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
575 576first strand
Strand 2
A
497 499anti-parallel
Strand 3
A
613 614anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
625 628first strand
Strand 2
A
705 709parallel
Strand 3
A
736 740parallel
Strand 4
A
590 594parallel
Strand 5
A
752 757parallel
Strand 6
A
760 765anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
892 893first strand
Strand 2
A
900 901anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1216 1217first strand
Strand 2
A
1193 1199anti-parallel
Strand 3
A
1248 1253anti-parallel
Strand 4
A
1256 1257anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1271 1273first strand
Strand 2
A
1350 1354parallel
Strand 3
A
1380 1384parallel
Strand 4
A
1222 1227parallel
Strand 5
A
1396 1401parallel
Strand 6
A
1404 1409anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1282 1283first strand
Strand 2
A
1322 1323anti-parallel
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